DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2019899
GeneSmg7
Synonyms
DescriptionSmg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
LocusNM_001160256 UCSC: chr1:154684125-154749776(-) OLP: chr1:154684125-154749776(-)
NM_001160257 UCSC: chr1:154684125-154725298(-) OLP: chr1:154684125-154725298(-)
NM_001005507 UCSC: chr1:154684125-154749776(-) OLP: chr1:154684125-154749776(-)
DB links


Entrez 226517
MGI 2682334
Ensembl ENSMUSG00000042772
Featureprotein-coding
GO_BP
  •   1 Terms
      nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184)
GO_MF
  •   1 Terms
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019899
(v2.0)		Smg7NM_001005507,NM_001160256,NM_001160257226517
27.173813.892914.331364.335562.806515.955717.567912.665750.710417.0629
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019899
(v2.0)		Smg7226517
824/3490.725612/3490.6925818/3494.78242551/3494.191247/349-0.8214249/349-1.0818
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019899
(v2.0)		Smg7226517
497/1481.2293307/1480.9318717/1485.76581866/1484.9647/148-2.191759/148-1.8993
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019899
(v2.0)		Smg7226517
41.89134593.09
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019899
(v2.0)		Smg7226517
21.81262394.84
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A