DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2019956
GeneSmyd5
SynonymsNN8-4AG
Rai15
Rrg1
DescriptionSET and MYND domain containing 5
LocusNM_144918 UCSC: chr6:85381970-85396423(+) OLP: chr6:85381970-85396423(+)
DB links


Entrez 232187
MGI 108048
Ensembl ENSMUSG00000033706
Vega OTTMUSG00000017438
Featureprotein-coding
GO_BP
GO_MF
  •   66 Terms
      rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179)
      protein C-terminal carboxyl O-methyltransferase activity (GO:0003880)
      tRNA (guanine-N2-)-methyltransferase activity (GO:0004809)
      methyltransferase activity (GO:0008168)
      C-methyltransferase activity (GO:0008169)
      N-methyltransferase activity (GO:0008170)
      O-methyltransferase activity (GO:0008171)
      S-methyltransferase activity (GO:0008172)
      RNA methyltransferase activity (GO:0008173)
      mRNA methyltransferase activity (GO:0008174)
      tRNA methyltransferase activity (GO:0008175)
      protein methyltransferase activity (GO:0008276)
      2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity (GO:0008425)
      rRNA methyltransferase activity (GO:0008649)
      rRNA (uridine-2'-O-)-methyltransferase activity (GO:0008650)
      rRNA (adenine-N6-)-methyltransferase activity (GO:0008988)
      DNA-methyltransferase activity (GO:0009008)
      tRNA (guanine-N1-)-methyltransferase activity (GO:0009019)
      rRNA (cytosine-C5-)-methyltransferase activity (GO:0009383)
      selenocysteine methyltransferase activity (GO:0016205)
      arginine N-methyltransferase activity (GO:0016273)
      protein-arginine N-methyltransferase activity (GO:0016274)
      lysine N-methyltransferase activity (GO:0016278)
      protein-lysine N-methyltransferase activity (GO:0016279)
      tRNA (uracil) methyltransferase activity (GO:0016300)
      tRNA (guanine) methyltransferase activity (GO:0016423)
      tRNA (adenine) methyltransferase activity (GO:0016426)
      tRNA (cytosine) methyltransferase activity (GO:0016427)
      tRNA (cytosine-5-)-methyltransferase activity (GO:0016428)
      tRNA (adenine-N1-)-methyltransferase activity (GO:0016429)
      rRNA (adenine) methyltransferase activity (GO:0016433)
      rRNA (cytosine) methyltransferase activity (GO:0016434)
      rRNA (guanine) methyltransferase activity (GO:0016435)
      rRNA (uridine) methyltransferase activity (GO:0016436)
      transferase activity (GO:0016740)
      protein C-terminal leucine carboxyl O-methyltransferase activity (GO:0018423)
      1-phenanthrol methyltransferase activity (GO:0018707)
      protein-arginine N5-methyltransferase activity (GO:0019702)
      methylarsonite methyltransferase activity (GO:0030792)
      dimethylarsinite methyltransferase activity (GO:0034541)
      4,5-dihydroxybenzo(a)pyrene methyltransferase activity (GO:0034807)
      1-hydroxypyrene methyltransferase activity (GO:0034931)
      1-hydroxy-6-methoxypyrene methyltransferase activity (GO:0034933)
      demethylmenaquinone methyltransferase activity (GO:0043770)
      cobalt-precorrin-6B C5-methyltransferase activity (GO:0043776)
      cobalt-precorrin-7 C15-methyltransferase activity (GO:0043777)
      cobalt-precorrin-5B C1-methyltransferase activity (GO:0043780)
      cobalt-precorrin-3 C17-methyltransferase activity (GO:0043782)
      dimethylamine methyltransferase activity (GO:0043791)
      hydroxyneurosporene-O-methyltransferase activity (GO:0043803)
      tRNA (adenine-57, 58-N(1)-) methyltransferase activity (GO:0043827)
      methylamine-specific methylcobalamin:coenzyme M methyltransferase activity (GO:0043833)
      trimethylamine methyltransferase activity (GO:0043834)
      methanol-specific methylcobalamin:coenzyme M methyltransferase activity (GO:0043851)
      monomethylamine methyltransferase activity (GO:0043852)
      metal ion binding (GO:0046872)
      P-methyltransferase activity (GO:0051994)
      Se-methyltransferase activity (GO:0051995)
      2-phytyl-1,4-naphthoquinone methyltransferase activity (GO:0052624)
      tRNA (uracil-2'-O-)-methyltransferase activity (GO:0052665)
      tRNA (cytosine-2'-O-)-methyltransferase activity (GO:0052666)
      phosphomethylethanolamine N-methyltransferase activity (GO:0052667)
      tRNA (cytosine-3-)-methyltransferase activity (GO:0052735)
      rRNA (cytosine-2'-O-)-methyltransferase activity (GO:0070677)
      rRNA (cytosine-N4-)-methyltransferase activity (GO:0071424)
      trihydroxyferuloyl spermidine O-methyltransferase activity (GO:0080012)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019956
(v2.0)		Smyd5NM_144918232187
7.707666.640565.4735975.3092103.58532.016723.63458.1138892.967934.7997
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019956
(v2.0)		Smyd5232187
654/509-0.1509389/509-0.502982/5090.9506149/509-0.4385108/509-0.1773702/509-0.1353
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019956
(v2.0)		Smyd5232187
312/2120.0445151/212-0.602273/2122.0023109/2120.367731/212-0.6982145/212-1.1392
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019956
(v2.0)		Smyd5232187
61.207411354.17
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019956
(v2.0)		Smyd5232187
18.03246627.32
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A