DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020106
GeneSnrpa
SynonymsRnu1a1
U1 snRNP
U1A
Descriptionsmall nuclear ribonucleoprotein polypeptide A
LocusNM_015782 UCSC: chr7:27972025-27981290(-) OLP: chr7:27972025-27981290(-)
NM_001046637 UCSC: chr7:27972025-27980779(-) OLP: chr7:27972025-27980779(-)
NM_001285825 UCSC: chr7:27972025-27981290(-) OLP: chr7:27972025-27981290(-)
DB links


Entrez 53607
MGI 1855690
Ensembl ENSMUSG00000061479
Vega OTTMUSG00000031830
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020106
(v2.0)		SnrpaNM_001046637,NM_001285825,NM_01578253607
29.466316.29478.1303444.930248.736671.77648.373117.573344.909576.1984
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020106
(v2.0)		Snrpa53607
686/512-0.0906457/512-0.2795268/5122.6387827/5122.017710/512-3.4945102/512-2.9085
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020106
(v2.0)		Snrpa53607
320/1980.1789185/198-0.213245/1983.8284698/1983.13295/198-3.016639/198-2.8956
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020106
(v2.0)		Snrpa53607
93.756815958.97
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020106
(v2.0)		Snrpa53607
25.17058629.27
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019529
(v1.0)		565C0118C10-3Mm.4633Snrpa53607
U028296NAP056786-1TC814949,TC814948Q621892.95533.03463.04823.22772.94183.03572.9173
0019529
(v1.0)		1324C0199C03-3Mm.4633Snrpa53607
U028296NAP056786-1TC814949,TC814948Q621892.93283.0123.04033.19093.00283.03152.8608
MOE430 N/A
Agilent44K N/A
Proteome N/A