DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020167
GeneSod1
SynonymsCu(2+)-Zn2+ superoxide dismutase
Cu/Zn-SOD
CuZnSOD
Ipo-1
Ipo1
Sod-1
SODC
Descriptionsuperoxide dismutase 1, soluble
LocusNM_011434 UCSC: chr16:90220987-90226569(+) OLP: chr16:90220987-90226569(+)
DB links


Entrez 20655
MGI 98351
Ensembl ENSMUSG00000022982
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020167
(v2.0)		Sod1NM_01143420655
886.058657.858168.78277.6632126.1941695.71233.538194.003139.0321922.37
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020167
(v2.0)		Sod120655
701/3990.2995497/3990.2002421/3993.63871414/3993.148657/399-0.7395414/399-0.5445
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020167
(v2.0)		Sod120655
345/1370.8151240/1370.6887341/1374.79841023/1374.20725/137-0.383147/137-0.4934
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020167
(v2.0)		Sod120655
54.690314338.24
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020167
(v2.0)		Sod120655
9.52369510.02
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019590
(v1.0)		11976H3130B11-3Mm.5274Sod120655
U017354NAP097171-001Sod1;TC841818,TC841816P08228U,F,23.89774.08524.36964.48373.66334.17854.158
MOE430 N/A
Agilent44K N/A
Proteome N/A