DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020444
GeneSrp54b
Synonyms
Descriptionsignal recognition particle 54B
LocusNM_001100109 UCSC: chr12:56256091-56290200(+) OLP: chr12:56256091-56290200(+)
DB links


Entrez 665155
MGI 3714357
Ensembl ENSMUSG00000079108
Featureprotein-coding
GO_BP
GO_MF
GO_CC
  •   2 Terms
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.653
SPR
1.597
Oo
1.372
1C
0.897
2C
0.834
4C
0.825
ESC
0.643
MEF
1.356
p1C
0.841
p4C
0.819
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020444
(v2.0)		Srp54bNM_001100109,NM_001100110,NM_011899665155
3.4926938.50422.55286.885845.815855.687653.3920721.67655.928845.59165
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0
H3.3
Rep.1
0
H3.3
Rep.2
0
H3K4me3
Rep.1
1.585
H3K4me3
Rep.2
0
H3K27me3
Rep.1
0
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020444
(v2.0)		Srp54b665155
0/000/000/002/01.5850/000/00
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0
H3.3
Rep.1
0
H3.3
Rep.2
0
H3K4me3
Rep.1
1.585
H3K4me3
Rep.2
0
H3K27me3
Rep.1
0
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020444
(v2.0)		Srp54b665155
0/000/000/002/01.5850/000/00
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A