DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020470
GeneSrsf4
SynonymsMNCb-2616
Sfrs4
SRp75
Descriptionserine/arginine-rich splicing factor 4
LocusNM_020587 UCSC: chr4:131429554-131457640(+) OLP: chr4:131429554-131457640(+)
DB links


Entrez 57317
MGI 1890577
Ensembl ENSMUSG00000028911
Vega OTTMUSG00000009577
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.117
SPR
1.424
Oo
1.523
1C
1.41
2C
1.212
4C
1.409
ESC
0.982
MEF
1.567
p1C
1.162
p4C
1.43
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020470
(v2.0)		Srsf4NM_02058757317
12.106225.545132.327424.686915.291324.64338.5909935.939313.529525.8889
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.206
H3.3
Rep.1
0.154
H3.3
Rep.2
3.272
H3K4me3
Rep.1
2.365
H3K4me3
Rep.2
-2.03
H3K27me3
Rep.1
-1.969
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020470
(v2.0)		Srsf457317
749/4550.2059549/4550.1544371/4553.2725936/4552.365526/455-2.0302175/455-1.9686
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.946
H3.3
Rep.1
0.654
H3.3
Rep.2
4.777
H3K4me3
Rep.1
3.937
H3K4me3
Rep.2
-1.578
H3K27me3
Rep.1
-1.532
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020470
(v2.0)		Srsf457317
400/1450.9464248/1450.6545354/1454.7769897/1453.937111/145-1.57875/145-1.5315
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020470
(v2.0)		Srsf457317
42.51113531.49
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020470
(v2.0)		Srsf457317
10.661410010.66
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A