DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020643
GeneStrn3
SynonymsSG2NA
Descriptionstriatin, calmodulin binding protein 3
LocusNM_052973 UCSC: chr12:52709528-52792901(-) OLP: chr12:52709528-52792901(-)
NM_001172098 UCSC: chr12:52709528-52792901(-) OLP: chr12:52709528-52792901(-)
DB links


Entrez 94186
MGI 2151064
Ensembl ENSMUSG00000020954
Featureprotein-coding
GO_BP
  •   5 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      response to estradiol (GO:0032355)
      negative regulation of intracellular estrogen receptor signaling pathway (GO:0033147)
      negative regulation of transcription, DNA-templated (GO:0045892)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020643
(v2.0)		Strn3NM_001172098,NM_05297394186
10.29953.478856.3900945.9798110.75818.631227.66073.7524287.61819.883
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020643
(v2.0)		Strn394186
775/3170.775526/3170.6128504/3174.21871257/3173.308516/317-2.181992/317-2.3651
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020643
(v2.0)		Strn394186
496/1361.3475318/1361.1036489/1365.32691178/1364.42075/136-2.488258/136-1.8022
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020643
(v2.0)		Strn394186
24.064711720.57
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020643
(v2.0)		Strn394186
2.8097933.02
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020051
(v1.0)		19319L0265G03-3Mm.23222Strn394186
U033931NAP010935-001Strn3;TC842418,TC842417Q9ERG2U,F,22.79952.91312.87123.28763.12933.25193.2515
0020051
(v1.0)		20361L0541C10-3Mm.23222Strn394186
U033931NAP010935-001Strn3;TC842417Q9ERG2U,F,23.99244.39074.84414.54093.98854.3574.047
MOE430 N/A
Agilent44K N/A
Proteome N/A