DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020708
GeneSumo1
SynonymsPIC1
SENTRIN
Smt3C
Ubl1
DescriptionSMT3 suppressor of mif two 3 homolog 1 (yeast)
LocusNM_009460 UCSC: chr1:59696278-59727678(-) OLP: chr1:59696278-59727678(-)
DB links


Entrez 22218
MGI 1197010
Ensembl ENSMUSG00000026021
Vega OTTMUSG00000022159
Featureprotein-coding
GO_BP
  •   11 Terms
      regulation of transcription, DNA-templated (GO:0006355)
      response to stress (GO:0006950)
      protein sumoylation (GO:0016925)
      PML body organization (GO:0030578)
      positive regulation of protein complex assembly (GO:0031334)
      positive regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032436)
      negative regulation of DNA binding (GO:0043392)
      negative regulation of sequence-specific DNA binding transcription factor activity (GO:0043433)
      negative regulation of transcription, DNA-templated (GO:0045892)
      palate development (GO:0060021)
      protein localization to nuclear pore (GO:0090204)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020708
(v2.0)		Sumo1NM_00946022218
38.125551.3832146.725208.131298.012233.09743.7383102.628251.87257.65
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020708
(v2.0)		Sumo122218
618/3120.472449/3120.4078198/3122.8972441/3121.822220/312-1.8544146/312-1.6847
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020708
(v2.0)		Sumo122218
313/1450.5939215/1450.4494190/1453.8826412/1452.81664/145-2.84152/145-2.0473
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020708
(v2.0)		Sumo122218
33.906410233.24
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020708
(v2.0)		Sumo122218
14.54137918.41
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A