DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020889
GeneTaf9
SynonymsTaf2g
DescriptionTAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
LocusNM_027139 UCSC: chr13:101421298-101426015(+) OLP: chr13:101421298-101426015(+)
NM_001015889 UCSC: chr13:101421562-101426015(+) OLP: chr13:101421562-101426015(+)
DB links


Entrez 108143
MGI 1888697
Ensembl ENSMUSG00000052293
Featureprotein-coding
GO_BP
  •   11 Terms
      transcription, DNA-templated (GO:0006351)
      DNA-templated transcription, initiation (GO:0006352)
      regulation of transcription, DNA-templated (GO:0006355)
      positive regulation of cell growth (GO:0030307)
      negative regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032435)
      negative regulation of apoptotic process (GO:0043066)
      histone H3 acetylation (GO:0043966)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      protein stabilization (GO:0050821)
      positive regulation of response to cytokine stimulus (GO:0060760)
      response to interleukin-1 (GO:0070555)
GO_MF
GO_CC
KEGG
  •   2 Terms
      Ribosome biogenesis in eukaryotes (mmu03008)
      Basal transcription factors (mmu03022)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020889
(v2.0)		Taf9NM_001015889,NM_027139,NM_027592108143
93.278174.094222.448563.319580.505127.98887.5611190.114433.573148.336
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020889
(v2.0)		Taf9108143
583/2950.4686432/2950.4328472/2954.2241054/2953.15752/295-4.58268/295-2.6896
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020889
(v2.0)		Taf9108143
365/1380.8856245/1380.7079459/1385.21641034/1384.21211/138-4.093642/138-2.2748
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020889
(v2.0)		Taf9108143
58.599612447.26
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020889
(v2.0)		Taf9108143
9.32957113.14
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020291
(v1.0)		6545H3026H12-3Mm.16976Taf9108143
U015190NAP098423-001Taf9;TC853837U,F,23.97944.14213.8564.00243.3763.42713.2794
MOE430 N/A
Agilent44K N/A
Proteome N/A