DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021051
GeneTceb3
SynonymsElongin A
Descriptiontranscription elongation factor B (SIII), polypeptide 3
LocusNM_013736 UCSC: chr4:135559285-135577564(-) OLP: chr4:135559285-135577564(-)
DB links


Entrez 27224
MGI 1351315
Ensembl ENSMUSG00000028668
Vega OTTMUSG00000009853
Featureprotein-coding
GO_BP
  •   4 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      transcription elongation from RNA polymerase II promoter (GO:0006368)
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.246
SPR
0.728
Oo
1.06
1C
2.251
2C
2.088
4C
0.926
ESC
1.208
MEF
0.986
p1C
2.087
p4C
0.986
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021051
(v2.0)		Tceb3NM_01373627224
16.61024.3514710.4716177.071121.4027.4309215.14158.68734121.3178.69297
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.324
H3.3
Rep.1
0.129
H3.3
Rep.2
2.141
H3K4me3
Rep.1
1.333
H3K4me3
Rep.2
-1.113
H3K27me3
Rep.1
-0.952
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021051
(v2.0)		Tceb327224
588/3290.324390/3290.1288123/3292.1411331/3291.333436/329-1.1128257/329-0.9516
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.83
H3.3
Rep.1
0.346
H3.3
Rep.2
3.402
H3K4me3
Rep.1
2.631
H3K4me3
Rep.2
-1.74
H3K27me3
Rep.1
-0.893
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021051
(v2.0)		Tceb327224
308/1210.8299167/1210.3461115/1213.4023303/1212.63078/121-1.7498/121-0.8932
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021051
(v2.0)		Tceb327224
31.63078338.11
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021051
(v2.0)		Tceb327224
9.89155717.35
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020445
(v1.0)		5624H3004A11-3Mm.27663Tceb327224
U025666NAP003929-001Tceb3;TC836938Q9R0Q5U,F,23.13133.13243.13523.27862.94653.04592.9951
0020445
(v1.0)		7123H3042H01-3Tceb327224
U025666NAP003929-001Tceb3;TC836938Q9R0Q5U,F,22.91972.8943.52573.80563.22833.37973.0607
MOE430 N/A
Agilent44K N/A
Proteome N/A