DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021112
GeneTdrd3
Synonyms
Descriptiontudor domain containing 3
LocusNM_001253755 UCSC: chr14:87816390-87914999(+) OLP: chr14:87816390-87914999(+)
NM_172605 UCSC: chr14:87816390-87945315(+) OLP: chr14:87816390-87945315(+)
DB links


Entrez 219249
MGI 2444023
Ensembl ENSMUSG00000022019
Vega OTTMUSG00000035265
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.816
SPR
1.719
Oo
1.964
1C
1.494
2C
1.337
4C
0.536
ESC
1.151
MEF
1.917
p1C
1.424
p4C
0.564
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021112
(v2.0)		Tdrd3NM_001253755,NM_172605219249
5.5406451.383291.150230.221220.72812.435613.174281.651525.52322.66741
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.366
H3.3
Rep.1
0.144
H3.3
Rep.2
2.053
H3K4me3
Rep.1
1.036
H3K4me3
Rep.2
-0.81
H3K27me3
Rep.1
-0.975
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021112
(v2.0)		Tdrd3219249
677/3680.3658441/3680.1445129/3682.0531301/3681.036350/368-0.8096283/368-0.9745
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.917
H3.3
Rep.1
0.416
H3.3
Rep.2
3.348
H3K4me3
Rep.1
2.326
H3K4me3
Rep.2
-1.509
H3K27me3
Rep.1
-1.499
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021112
(v2.0)		Tdrd3219249
373/1380.9168200/1380.4165125/1383.3482279/1382.32611/138-1.508773/138-1.4988
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021112
(v2.0)		Tdrd3219249
34.883412827.25
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021112
(v2.0)		Tdrd3219249
4.1258894.64
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A