DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021228
GeneTgfbrap1
Synonyms
Descriptiontransforming growth factor, beta receptor associated protein 1
LocusNM_001013025 UCSC: chr1:43104114-43155467(-) OLP: chr1:43104114-43155467(-)
DB links


Entrez 73122
MGI 2447427
Ensembl ENSMUSG00000070939
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.095
SPR
1.486
Oo
1.615
1C
1.324
2C
1.201
4C
0.485
ESC
0.682
MEF
1.711
p1C
1.191
p4C
0.394
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021228
(v2.0)		Tgfbrap1NM_00101302573122
11.440629.627540.163920.080414.87872.052693.8128150.379514.53771.47976
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.109
H3.3
Rep.1
-0.108
H3.3
Rep.2
3.03
H3K4me3
Rep.1
2.022
H3K4me3
Rep.2
-2.091
H3K27me3
Rep.1
-2.001
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021228
(v2.0)		Tgfbrap173122
594/3860.1088388/386-0.1085267/3863.03626/3862.021821/386-2.0907145/386-2.0006
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.314
H3.3
Rep.1
0.051
H3.3
Rep.2
3.98
H3K4me3
Rep.1
3.003
H3K4me3
Rep.2
-2.351
H3K27me3
Rep.1
-1.994
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021228
(v2.0)		Tgfbrap173122
332/1870.3138210/1870.0509258/1873.9803603/1873.00358/187-2.35170/187-1.9938
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021228
(v2.0)		Tgfbrap173122
38.57239540.6
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021228
(v2.0)		Tgfbrap173122
12.62556519.42
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A