| Gene | Top2a |
| Synonyms | DNA Topoisomerase II alpha
Top-2 |
| Description | topoisomerase (DNA) II alpha |
| Locus | NM_011623 UCSC: chr11:98854261-98885503(-) OLP: chr11:98854261-98885503(-)
|
| DB links |
Entrez 21973
MGI 98790
Ensembl ENSMUSG00000020914
Vega OTTMUSG00000006446
|
| Feature | protein-coding |
| GO_BP |
-
 19 Terms
|
| GO_MF |
-
22 Terms
|
| GO_CC |
-
8 Terms
|
| KEGG | |
| Ver2_FPKM |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | ESC_FPKM | MEF_FPKM | p1C_FPKM | p4C_FPKM | iPSC_FPKM |
|---|
2021813
(v2.0) | Top2a | NM_011623 | 21973
| 3.28192 | 25.5543 | 12.2973 | 53.3564 | 71.3503 | 199.419 | 154.156 | 10.6214 | 68.3302 | 200.75 |
|
| SPR_Histone_Erkek_5KaroundTSS |
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2021813
(v2.0) | Top2a | 21973
| 595/387 | 0.1075 | 403/387 | -0.0576 | 119/387 | 1.8672 | 330/387 | 1.0964 | 73/387 | -0.3444 | 584/387 | -0.0057 |
|
| SPR_Histone_Erkek_2KaroundTSS |
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2021813
(v2.0) | Top2a | 21973
| 280/151 | 0.3759 | 185/151 | 0.1757 | 107/151 | 3.006 | 302/151 | 2.3122 | 23/151 | -0.6349 | 204/151 | -0.1642 |
|
| SPR_Methy_Kobayashi_5KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2021813
(v2.0) | Top2a | 21973
| 55.4176 | 148 | 37.44 |
|
| SPR_Methy_Kobayashi_2KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2021813
(v2.0) | Top2a | 21973
| 15.868 | 89 | 17.83 |
|
| SOLiD_OocyteTo4C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno1C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno4C_FPKM_gene_guided |
N/A |
| Illumina_Oo_2C_FPKM_gene_guided |
N/A |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
N/A |
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0021192
(v1.0) | 3476 | C0667D09-3 | Mm.4237 | Top2a | 21973
| U033378 | NAP035707-1 | Top2a; | TC924722 | Q01320 | U,F,2 | 2.3521 | 2.4062 | 2.6761 | 2.661 | 2.5947 | 2.7317 | 2.6637 |
0021192
(v1.0) | 6883 | H3036F09-3 | Mm.4237 | Top2a | 21973
| U033378 | NAP117250-1 | Top2a; | TC924727,TC924725,TC924723,TC924721 | Q01320 | U,F,2 | 2.2992 | 2.6176 | 2.7355 | 2.761 | 2.5707 | 3.0387 | 2.9149 |
0021192
(v1.0) | 18941 | L0237F01-3 | Mm.4237 | Top2a | 21973
| U033378 | NAP001569-002 | Top2a; | TC924723,TC924720 | Q01320 | U,F,2 | 2.7755 | 3.15 | 3.6311 | 3.9882 | 3.3536 | 3.6752 | 3.6466 |
|
| MOE430 |
N/A |
| Agilent44K |
N/A |
| Proteome |
N/A |
