DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021898
GeneTrappc10
SynonymsLOC380642
Tmem1
Descriptiontrafficking protein particle complex 10
LocusNM_001081055 UCSC: chr10:77649471-77707387(-) OLP: chr10:77649471-77707387(-)
DB links


Entrez 216131
MGI 1336209
Ensembl ENSMUSG00000000374
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.272
SPR
1.574
Oo
1.913
1C
1.748
2C
1.503
4C
0.659
ESC
1.078
MEF
1.953
p1C
1.454
p4C
0.679
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021898
(v2.0)		Trappc10NM_001081055216131
17.70636.523580.845354.967730.81153.5584910.961988.712927.46593.78052
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.075
H3.3
Rep.1
-0.344
H3.3
Rep.2
2.248
H3K4me3
Rep.1
0.928
H3K4me3
Rep.2
-1.418
H3K27me3
Rep.1
-1.372
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021898
(v2.0)		Trappc10216131
627/463-0.0752395/463-0.3445185/4632.248351/4630.92841/463-1.4177270/463-1.3724
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.102
H3.3
Rep.1
-0.424
H3.3
Rep.2
3.422
H3K4me3
Rep.1
2.081
H3K4me3
Rep.2
-2.706
H3K27me3
Rep.1
-2.18
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021898
(v2.0)		Trappc10216131
285/1860.1023150/186-0.4239174/1863.4219316/1862.08116/186-2.70661/186-2.1801
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021898
(v2.0)		Trappc10216131
64.692813149.38
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021898
(v2.0)		Trappc10216131
16.83438021.04
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A