DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021904
GeneTrappc3
SynonymsBet3
Descriptiontrafficking protein particle complex 3
LocusNM_013718 UCSC: chr4:125939649-125953127(+) OLP: chr4:125939649-125953127(+)
DB links


Entrez 27096
MGI 1351486
Ensembl ENSMUSG00000028847
Vega OTTMUSG00000009355
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.73
SPR
1.568
Oo
1.637
1C
1.24
2C
1.473
4C
1.484
ESC
1.489
MEF
1.709
p1C
1.536
p4C
1.568
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021904
(v2.0)		Trappc3NM_01371827096
52.737435.942642.3216.362528.703329.448229.803550.138433.356135.9946
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.018
H3.3
Rep.1
-0.391
H3.3
Rep.2
2.442
H3K4me3
Rep.1
1.584
H3K4me3
Rep.2
-0.747
H3K27me3
Rep.1
-0.94
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021904
(v2.0)		Trappc327096
713/506-0.018418/506-0.3909231/5062.4419605/5061.584372/506-0.7472399/506-0.9395
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.251
H3.3
Rep.1
-0.246
H3.3
Rep.2
3.408
H3K4me3
Rep.1
2.641
H3K4me3
Rep.2
-0.095
H3K27me3
Rep.1
-0.443
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021904
(v2.0)		Trappc327096
333/1960.2507179/196-0.2457181/1963.4075491/1962.640744/196-0.0954218/196-0.4432
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021904
(v2.0)		Trappc327096
60.2614840.72
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021904
(v2.0)		Trappc327096
27.03598332.57
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A