DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022088
GeneTsc22d4
SynonymsThg-1pit
DescriptionTSC22 domain family, member 4
LocusNM_029805 UCSC: chr5:138187197-138209681(+) OLP: chr5:138187197-138209681(+)
NM_023910 UCSC: chr5:138187197-138200975(+) OLP: chr5:138187197-138200975(+)
DB links


Entrez 78829
MGI 1926079
Ensembl ENSMUSG00000029723
Vega OTTMUSG00000022818
Featureprotein-coding
GO_BP
  •   3 Terms
GO_MF
  •   2 Terms
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      protein binding (GO:0005515)
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.492
SPR
2.054
Oo
2.147
1C
2.079
2C
1.977
4C
1.078
ESC
1.318
MEF
2.361
p1C
2.05
p4C
0.984
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022088
(v2.0)		Tsc22d4NM_023910,NM_02980578829
30.0449112.207139.181119.02993.756710.973719.7748228.427111.3248.64274
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.598
H3.3
Rep.1
-0.134
H3.3
Rep.2
2.539
H3K4me3
Rep.1
2.084
H3K4me3
Rep.2
0.901
H3K27me3
Rep.1
0.861
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022088
(v2.0)		Tsc22d478829
854/3950.5983390/395-0.1342194/3952.539669/3952.0844178/3950.90081088/3950.8608
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.897
H3.3
Rep.1
-0.057
H3.3
Rep.2
3.127
H3K4me3
Rep.1
2.746
H3K4me3
Rep.2
1.208
H3K27me3
Rep.1
1.167
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022088
(v2.0)		Tsc22d478829
445/1670.8971174/167-0.0566128/1673.1274451/1672.746294/1671.2084570/1671.167
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022088
(v2.0)		Tsc22d478829
58.638516036.65
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022088
(v2.0)		Tsc22d478829
23.32348328.1
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A