DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022214
GeneTtll5
SynonymsSTAMP
Descriptiontubulin tyrosine ligase-like family, member 5
LocusNM_001081423 UCSC: chr12:87165900-87394710(+) OLP: chr12:87165900-87394710(+)
DB links


Entrez 320244
MGI 2443657
Ensembl ENSMUSG00000012609
Vega OTTMUSG00000022958
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.807
SPR
1.122
Oo
1.23
1C
1.055
2C
1.01
4C
0.364
ESC
0.608
MEF
1.277
p1C
0.94
p4C
0.41
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022214
(v2.0)		Ttll5NM_001081423320244
5.418712.242315.991310.35719.235691.311523.0529617.90677.710881.57069
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.073
H3.3
Rep.1
-0.191
H3.3
Rep.2
2.466
H3K4me3
Rep.1
1.44
H3K4me3
Rep.2
-2.139
H3K27me3
Rep.1
-2.128
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022214
(v2.0)		Ttll5320244
737/4910.073466/491-0.1912228/4912.4655531/4911.439626/491-2.1391169/491-2.1281
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.353
H3.3
Rep.1
-0.041
H3.3
Rep.2
3.731
H3K4me3
Rep.1
2.732
H3K4me3
Rep.2
-2.207
H3K27me3
Rep.1
-2.042
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022214
(v2.0)		Ttll5320244
343/1880.353198/188-0.0412218/1883.731502/1882.73199/188-2.206568/188-2.0423
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022214
(v2.0)		Ttll5320244
71.433614848.27
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022214
(v2.0)		Ttll5320244
16.22179018.02
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A