DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022291
GeneTxnl4a
SynonymsD18Wsu98e
ENSMUSG00000057130
Txnl4
U5-15kDa
Descriptionthioredoxin-like 4A
LocusNM_025299 UCSC: chr18:80403537-80422590(+) OLP: chr18:80403537-80422590(+)
NM_001038608 UCSC: chr18:80403537-80409471(+) OLP: chr18:80403537-80409471(+)
NM_178604 UCSC: chr18:80403585-80409471(+) OLP: chr18:80403585-80409471(+)
NM_001042408 UCSC: chr18:80403606-80409471(+) OLP: chr18:80403606-80409471(+)
DB links


Entrez 27366
MGI 1351613
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.638
SPR
1.457
Oo
1.5
1C
2.115
2C
2.125
4C
2.032
ESC
1.946
MEF
1.584
p1C
2.112
p4C
2.073
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022291
(v2.0)		Txnl4aNM_001038608,NM_001042408,NM_025299,NM_17860427366
42.415727.670430.6437129.446132.497106.57787.246737.3333128.393117.197
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.063
H3.3
Rep.1
-0.208
H3.3
Rep.2
1.902
H3K4me3
Rep.1
0.71
H3K4me3
Rep.2
-2.08
H3K27me3
Rep.1
-1.667
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022291
(v2.0)		Txnl4a27366
650/4360.0632409/436-0.2079137/4361.9018284/4360.709624/436-2.0803207/436-1.6668
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.538
H3.3
Rep.1
0.244
H3.3
Rep.2
3.303
H3K4me3
Rep.1
2.197
H3K4me3
Rep.2
-1.831
H3K27me3
Rep.1
-2.092
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022291
(v2.0)		Txnl4a27366
299/1440.5381185/1440.2437126/1443.3031266/1442.19719/144-1.831350/144-2.0923
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022291
(v2.0)		Txnl4a27366
83.409416550.55
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022291
(v2.0)		Txnl4a27366
14.4759115.91
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A