DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022413
GeneUbxn7
SynonymsUbxd7
DescriptionUBX domain protein 7
LocusNM_177633 UCSC: chr16:32332338-32393833(+) OLP: chr16:32332338-32393833(+)
DB links


Entrez 224111
MGI 2146388
Ensembl ENSMUSG00000053774
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.603
SPR
1.142
Oo
1.491
1C
1.482
2C
1.343
4C
1.118
ESC
1.227
MEF
1.301
p1C
1.265
p4C
1.109
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022413
(v2.0)		Ubxn7NM_177633224111
3.0073212.857629.974429.337521.052512.118715.857619.015117.406611.8503
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.189
H3.3
Rep.1
0.108
H3.3
Rep.2
2.802
H3K4me3
Rep.1
1.904
H3K4me3
Rep.2
-1.601
H3K27me3
Rep.1
-1.018
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022413
(v2.0)		Ubxn7224111
589/3620.189423/3620.1082214/3622.8018541/3621.903628/362-1.6006270/362-1.0183
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
1.029
H3.3
Rep.1
0.718
H3.3
Rep.2
4.235
H3K4me3
Rep.1
3.429
H3K4me3
Rep.2
-2.067
H3K27me3
Rep.1
-1.093
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022413
(v2.0)		Ubxn7224111
345/1181.0288211/1180.7175201/1184.2354515/1183.42946/118-2.067583/118-1.093
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022413
(v2.0)		Ubxn7224111
56.570712844.2
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022413
(v2.0)		Ubxn7224111
12.1978015.25
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A