DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022590
GeneUsp49
Synonyms
Descriptionubiquitin specific peptidase 49
LocusNM_198421 UCSC: chr17:47767639-47821016(+) OLP: chr17:47767639-47821016(+)
DB links


Entrez 224836
MGI 2685391
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.885
SPR
1.277
Oo
1.405
1C
1.082
2C
0.805
4C
0.772
ESC
0.532
MEF
1.455
p1C
0.769
p4C
0.688
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022590
(v2.0)		Usp49NM_198421224836
6.6759417.916224.421211.07155.383354.919242.4065727.49414.875213.87151
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.302
H3.3
Rep.1
0.164
H3.3
Rep.2
4.508
H3K4me3
Rep.1
3.585
H3K4me3
Rep.2
-1.353
H3K27me3
Rep.1
-1.04
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022590
(v2.0)		Usp49224836
704/4000.3021486/4000.1644772/4004.50841919/4003.585337/400-1.3531294/400-1.0397
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.472
H3.3
Rep.1
0.336
H3.3
Rep.2
5.448
H3K4me3
Rep.1
4.329
H3K4me3
Rep.2
-0.888
H3K27me3
Rep.1
-0.637
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022590
(v2.0)		Usp49224836
343/1730.4723237/1730.3362665/1735.4481401/1734.329122/173-0.8876168/173-0.637
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022590
(v2.0)		Usp49224836
42.152413531.22
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022590
(v2.0)		Usp49224836
9.49131009.49
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A