DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022661
GeneVdac3
Synonyms
Descriptionvoltage-dependent anion channel 3
LocusNM_011696 UCSC: chr8:23687547-23704285(-) OLP: chr8:23687547-23704285(-)
NM_001198998 UCSC: chr8:23687547-23704285(-) OLP: chr8:23687547-23704285(-)
DB links


Entrez 22335
MGI 106922
Ensembl ENSMUSG00000008892
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.707
SPR
2.259
Oo
2.256
1C
1.575
2C
1.917
4C
2.138
ESC
2.187
MEF
2.312
p1C
1.912
p4C
2.139
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022661
(v2.0)		Vdac3NM_001198998,NM_01169622335
49.893180.624179.23336.58781.5246136.391152.863204.15980.6429136.72
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.225
H3.3
Rep.1
0.148
H3.3
Rep.2
2.179
H3K4me3
Rep.1
0.964
H3K4me3
Rep.2
-0.449
H3K27me3
Rep.1
-0.03
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022661
(v2.0)		Vdac322335
704/4220.225507/4220.1482161/4222.1789328/4220.963674/422-0.4487626/422-0.0304
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.41
H3.3
Rep.1
0.289
H3.3
Rep.2
3.297
H3K4me3
Rep.1
2.107
H3K4me3
Rep.2
-0.696
H3K27me3
Rep.1
-0.73
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022661
(v2.0)		Vdac322335
338/1780.4103236/1780.2892153/1783.297308/1782.106826/178-0.6964162/178-0.7299
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022661
(v2.0)		Vdac322335
72.199215646.28
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022661
(v2.0)		Vdac322335
21.963310021.96
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0022014
(v1.0)		18666L0221B07-3Mm.133962Vdac322335
U029637NAP095316-001TC897573,TC897571Q60931U,F,23.49993.67193.53753.54743.76323.64873.7771
MOE430 N/A
Agilent44K N/A
Proteome N/A