DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2023451
GeneZc3h3
SynonymsSmicl
Descriptionzinc finger CCCH type containing 3
LocusNM_172121 UCSC: chr15:75584877-75672338(-) OLP: chr15:75584877-75672338(-)
DB links


Entrez 223642
MGI 2663721
Ensembl ENSMUSG00000075600
Featureprotein-coding
GO_BP
  •   5 Terms
GO_MF
GO_CC
  •   2 Terms
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.953
SPR
1.777
Oo
1.835
1C
1.339
2C
0.894
4C
0.859
ESC
0.942
MEF
1.926
p1C
0.916
p4C
0.806
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023451
(v2.0)		Zc3h3NM_172121223642
7.984458.776767.385720.82136.834866.226267.7499483.37947.24025.40106
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.079
H3.3
Rep.1
-0.262
H3.3
Rep.2
2.022
H3K4me3
Rep.1
1.059
H3K4me3
Rep.2
-2.724
H3K27me3
Rep.1
-2.196
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2023451
(v2.0)		Zc3h3223642
657/4360.0786394/436-0.2617149/4362.0221362/4361.058615/436-2.7241143/436-2.1958
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.352
H3.3
Rep.1
-0.049
H3.3
Rep.2
3.344
H3K4me3
Rep.1
2.331
H3K4me3
Rep.2
-2.607
H3K27me3
Rep.1
-1.998
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2023451
(v2.0)		Zc3h3223642
270/1480.3524155/148-0.0492133/1483.344300/1482.33115/148-2.606755/148-1.998
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2023451
(v2.0)		Zc3h3223642
63.22514743.01
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2023451
(v2.0)		Zc3h3223642
17.629910017.63
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A