DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2005109

Gene

Crcp

Synonyms

Description

calcitonin gene-related peptide-receptor component protein

Locus

NM_007761 UCSC: chr5:130505176-130536653(+) OLP: chr5:130505176-130536653(+)

DB links

Entrez 12909
MGI 1100818
Ensembl ENSMUSG00000025532
Vega OTTMUSG00000022713

Feature

protein-coding

GO_BP

8 Terms

GO_MF

4 Terms

GO_CC

5 Terms

KEGG

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2005109 (v2.0)	Crcp	NM_007761	12909	22.1131	4.91626	7.79375	22.9599	37.2726	20.3222	7.39074	7.69125	31.0969	25.3488

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2005109 (v2.0)	Crcp	12909	678/487	-0.0354	381/487	-0.4692	194/487	2.2451	562/487	1.5331	92/487	-0.3431	647/487	-0.1891

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2005109 (v2.0)	Crcp	12909	283/185	0.0999	147/185	-0.4451	92/185	2.5172	287/185	1.9503	23/185	-0.9207	203/185	-0.4624

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2005109 (v2.0)	Crcp	12909	73.5598	140	52.54

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2005109 (v2.0)	Crcp	12909	19.2619	70	27.52

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0005175 (v1.0)	12247	H3138E01-5		Crcp	12909	U006240	NAP009049-001	Crcp;	TC887861,TC887860	O35427	U,F,2	2.4866	2.6142	2.8154	2.8978	2.5095	2.724	2.5935
0005175 (v1.0)	18907	L0236A10-3	Mm.18072	Crcp	12909	U006240	NAP009049-001	Crcp;	TC887860	O35427	U,F,2	3.9299	3.8278	4.0121	4.1456	4.2986	4.1595	4.2123

N/A

N/A

N/A