DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2006593
GeneElk1
SynonymsElk-1
DescriptionELK1, member of ETS oncogene family
LocusNM_007922 UCSC: chrX:20510521-20527734(-) OLP: chrX:20510521-20527734(-)
DB links


Entrez 13712
MGI 101833
Ensembl ENSMUSG00000009406
Vega OTTMUSG00000017185
Featureprotein-coding
GO_BP
  •   11 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      transcription from RNA polymerase II promoter (GO:0006366)
      response to light stimulus (GO:0009416)
      cell differentiation (GO:0030154)
      positive regulation of transcription, DNA-templated (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      cellular response to lipid (GO:0071396)
      cellular response to gamma radiation (GO:0071480)
      positive regulation of neuron death (GO:1901216)
GO_MF
  •   9 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      sequence-specific DNA binding RNA polymerase II transcription factor activity (GO:0000981)
      core promoter binding (GO:0001047)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (GO:0001077)
      DNA binding (GO:0003677)
      chromatin binding (GO:0003682)
      double-stranded DNA binding (GO:0003690)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      sequence-specific DNA binding (GO:0043565)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006593
(v2.0)		Elk1NM_00792213712
4.740365.259898.8374115.48136.644428.46799.025128.33867.02888.18708
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2006593
(v2.0)		Elk113712
337/2210.0955254/2210.084259/2211.6429167/2210.919410/221-2.297642/221-2.9503
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2006593
(v2.0)		Elk113712
153/1000.0998102/100-0.086754/1002.5733146/1001.85125/100-2.0617/100-3.0469
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2006593
(v2.0)		Elk113712
36.25145961.44
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2006593
(v2.0)		Elk113712
12.03023435.38
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A