DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2010973
GeneKdm6a
SynonymsUtx
Descriptionlysine (K)-specific demethylase 6A
LocusNM_009483 UCSC: chrX:17739793-17856484(+) OLP: chrX:17739793-17856484(+)
DB links


Entrez 22289
MGI 1095419
Ensembl ENSMUSG00000037369
Vega OTTMUSG00000016960
Featureprotein-coding
GO_BP
GO_MF
  •   14 Terms
      sulfonate dioxygenase activity (GO:0000907)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      protein binding (GO:0005515)
      oxidoreductase activity (GO:0016491)
      2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity (GO:0018602)
      procollagen-proline dioxygenase activity (GO:0019798)
      hypophosphite dioxygenase activity (GO:0034792)
      identical protein binding (GO:0042802)
      DNA-N1-methyladenine dioxygenase activity (GO:0043734)
      metal ion binding (GO:0046872)
      dioxygenase activity (GO:0051213)
      C-19 gibberellin 2-beta-dioxygenase activity (GO:0052634)
      C-20 gibberellin 2-beta-dioxygenase activity (GO:0052635)
      histone demethylase activity (H3-K27 specific) (GO:0071558)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010973
(v2.0)		Kdm6aNM_00948322289
3.5660382.4269138.61644.291842.4996.282711.8456127.83948.90246.37568
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010973
(v2.0)		Kdm6a22289
467/1680.958281/1680.6229527/1685.15251372/1684.340626/168-0.615127/168-0.9944
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010973
(v2.0)		Kdm6a22289
355/991.3208162/990.5894525/995.84381290/9957/99-1.63139/99-1.9028
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010973
(v2.0)		Kdm6a22289
23.606212019.67
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010973
(v2.0)		Kdm6a22289
6.5397966.81
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A