DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2012172

Gene

Mcm3ap

Synonyms

GANP

Description

minichromosome maintenance deficient 3 (S. cerevisiae) associated protein

Locus

NM_019434 UCSC: chr10:75931716-75978602(+) OLP: chr10:75931716-75978602(+)

DB links

Entrez 54387
MGI 1930089
Ensembl ENSMUSG00000001150

Feature

protein-coding

GO_BP

4 Terms

GO_MF

GO_CC

4 Terms

KEGG

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2012172 (v2.0)	Mcm3ap	NM_019434	54387	4.51861	47.7246	26.4038	9.53134	10.4273	8.15897	13.4687	21.3524	10.5341	10.3817

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2012172 (v2.0)	Mcm3ap	54387	676/445	0.0902	386/445	-0.3206	95/445	1.3496	216/445	0.287	12/445	-3.0529	82/445	-3.0163

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2012172 (v2.0)	Mcm3ap	54387	328/178	0.3672	163/178	-0.2417	88/178	2.5059	195/178	1.45	0/178	-5.4513	34/178	-2.9328

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2012172 (v2.0)	Mcm3ap	54387	137.783	188	73.29

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2012172 (v2.0)	Mcm3ap	54387	51.2935	98	52.34

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0012200 (v1.0)	4987	G0118B09-3	Mm.30098	Mcm3ap	54387	U011678	NAP120656-001	Mcm3ap;	TC898949	Q9WUU9	U,F	3.8968	3.8379	3.6302	3.5746	3.4992	3.5645	3.5209
0012200 (v1.0)	13635	J0062B04-3	Mm.30098	Mcm3ap	54387	U011678	NAP056246-1	Mcm3ap;		Q9WUU9	U,F	3.5803	3.5439	3.7004	3.636	3.5272	3.6302	3.5492

N/A

N/A

N/A