DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017158
GenePpfia1
Synonymsliprin
Liprin-alpha1
Descriptionprotein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
LocusNM_001195086 UCSC: chr7:151662660-151739634(-) OLP: chr7:151662660-151739634(-)
NM_001033319 UCSC: chr7:151662660-151739634(-) OLP: chr7:151662660-151739634(-)
DB links


Entrez 233977
MGI 1924750
Ensembl ENSMUSG00000037519
Vega OTTMUSG00000043428
Featureprotein-coding
GO_BP
  •   2 Terms
      negative regulation of stress fiber assembly (GO:0051497)
      negative regulation of establishment of protein localization to plasma membrane (GO:0090005)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017158
(v2.0)		Ppfia1NM_001033319,NM_001195086233977
9.71074142.031185.222174.88591.15935.7397316.7997177.04682.86796.02491
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017158
(v2.0)		Ppfia1233977
666/489-0.067420/489-0.3349135/4891.7195358/4890.87894/489-0.3183702/489-0.0776
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017158
(v2.0)		Ppfia1233977
326/1850.3031173/185-0.2117124/1852.9438280/1851.914828/185-0.6477251/185-0.1583
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017158
(v2.0)		Ppfia1233977
49.655910646.85
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017158
(v2.0)		Ppfia1233977
19.25436828.32
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A