DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020431
GeneSrf
Synonyms
Descriptionserum response factor
LocusNM_020493 UCSC: chr17:46683788-46693111(-) OLP: chr17:46683788-46693111(-)
DB links


Entrez 20807
MGI 106658
Ensembl ENSMUSG00000015605
Featureprotein-coding
GO_BP
GO_MF
  •   16 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity (GO:0000983)
      RNA polymerase II transcription factor binding transcription factor activity (GO:0001076)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (GO:0001077)
      RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (GO:0001228)
      DNA binding (GO:0003677)
      chromatin binding (GO:0003682)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity (GO:0003705)
      protein binding (GO:0005515)
      transcription factor binding (GO:0008134)
      serum response element binding (GO:0010736)
      chromatin DNA binding (GO:0031490)
      protein homodimerization activity (GO:0042803)
      sequence-specific DNA binding (GO:0043565)
      protein dimerization activity (GO:0046983)
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020431
(v2.0)		SrfNM_02049320807
13.331347.501965.594527.026420.90197.6922716.4903132.98523.60428.78182
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020431
(v2.0)		Srf20807
895/5080.3037501/508-0.1359756/5084.14251671/5083.0428101/508-0.2702824/5080.0983
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020431
(v2.0)		Srf20807
480/1950.7836263/1950.3139595/1955.12581260/1954.005846/195-0.0254400/1950.4352
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020431
(v2.0)		Srf20807
88.473922339.67
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020431
(v2.0)		Srf20807
17.038113612.53
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019845
(v1.0)		15862K0304A09-3Mm.45044Srf20807
U037861NAP098796-001Srf;TC887543Q9JM73U,F,23.19483.04632.96393.6333.29713.44093.4458
0019845
(v1.0)		15981K0315F05-3Mm.45044Srf20807
U037861NAP098796-001Srf;TC887544,TC887543Q9JM73U,F,23.29983.1623.22083.45673.08083.31993.4703
MOE430 N/A
Agilent44K N/A
Proteome N/A