DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020482
GeneSsbp3
Synonyms
Descriptionsingle-stranded DNA binding protein 3
LocusNM_023672 UCSC: chr4:106584075-106722299(+) OLP: chr4:106584075-106722299(+)
NM_198438 UCSC: chr4:106584075-106722299(+) OLP: chr4:106584075-106722299(+)
DB links


Entrez 72475
MGI 1919725
Ensembl ENSMUSG00000061887
Vega OTTMUSG00000008276
Featureprotein-coding
GO_BP
  •   12 Terms
      hematopoietic progenitor cell differentiation (GO:0002244)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      protein complex assembly (GO:0006461)
      positive regulation of cell proliferation (GO:0008284)
      prechordal plate formation (GO:0021501)
      midbrain-hindbrain boundary initiation (GO:0021547)
      positive regulation of transcription, DNA-templated (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      head development (GO:0060322)
      head morphogenesis (GO:0060323)
      positive regulation of anterior head development (GO:2000744)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020482
(v2.0)		Ssbp3NM_023672,NM_19843872475
10.380125.476738.877514.98567.6127812.966813.23450.87058.5110615.0105
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020482
(v2.0)		Ssbp372475
896/4190.5826515/4190.181173/4192.292506/4191.597798/419-0.0379667/4190.0712
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020482
(v2.0)		Ssbp372475
518/1411.3582291/1410.9243155/1413.6278430/1412.917841/1410.2686324/1410.5975
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020482
(v2.0)		Ssbp372475
60.803920329.95
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020482
(v2.0)		Ssbp372475
17.414913313.09
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019895
(v1.0)		18407L0206A04-3Mm.198857Ssbp372475
NAP034657-1TC810372Q9D0324.22594.41774.89354.68674.38294.57554.3581
0019895
(v1.0)		21591L0862G11-3Mm.195635Ssbp372475
U042559NAP095424-0012610200M23Rik;TC810372Q9D032U,F,22.53952.36892.4182.4932.69992.69672.8652
MOE430 N/A
Agilent44K N/A
Proteome N/A