DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021052
GeneTcerg1
Synonymsca150
Fbp28
p144
Taf2s
Descriptiontranscription elongation regulator 1 (CA150)
LocusNM_001289526 UCSC: chr18:42671141-42735439(+) OLP: chr18:42671141-42735439(+)
NM_001039474 UCSC: chr18:42671141-42735439(+) OLP: chr18:42671141-42735439(+)
NR_110344 UCSC: chr18:42671141-42735439(+) OLP: chr18:42671141-42735439(+)
DB links


Entrez 56070
MGI 1926421
Ensembl ENSMUSG00000024498
Vega OTTMUSG00000037173
Featureprotein-coding
GO_BP
  •   4 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      transcription from RNA polymerase II promoter (GO:0006366)
GO_MF
  •   5 Terms
      RNA polymerase II repressing transcription factor binding (GO:0001103)
      RNA polymerase II transcription corepressor activity (GO:0001106)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      poly(A) RNA binding (GO:0044822)
      proline-rich region binding (GO:0070064)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021052
(v2.0)		Tcerg1NM_001039474,NM_001289526,NR_11034456070
6.473146.193779.60369.9953410.28317.19967.1548311.268211.716116.2127
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021052
(v2.0)		Tcerg156070
634/3860.2026410/386-0.0291123/3861.9182269/3860.806378/386-0.2464544/386-0.1041
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021052
(v2.0)		Tcerg156070
293/1340.6121193/1340.4075121/1343.3407245/1342.180910/134-1.59384/134-1.2581
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021052
(v2.0)		Tcerg156070
49.128512140.6
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021052
(v2.0)		Tcerg156070
11.83658214.43
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020446
(v1.0)		18367L0204A04-3Mm.67998Tcerg156070
U043672NAP099315-001Tcerg1;TC941573,TC821448Q9R0R5U,F,23.62773.50943.56473.59894.08883.79474.0415
MOE430 N/A
Agilent44K N/A
Proteome N/A