DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2023055
GeneVps39
SynonymsmVam6
Vam6
Vam6P
Descriptionvacuolar protein sorting 39 (yeast)
LocusNR_027618 UCSC: chr2:120142197-120178869(-) OLP: chr2:120142197-120178869(-)
NM_147153 UCSC: chr2:120142197-120178869(-) OLP: chr2:120142197-120178869(-)
NM_178851 UCSC: chr2:120142197-120178869(-) OLP: chr2:120142197-120178869(-)
DB links


Entrez 269338
MGI 2443189
Ensembl ENSMUSG00000027291
Vega OTTMUSG00000015284
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023055
(v2.0)		Vps39NM_147153,NM_178851,NR_027618269338
10.171144.727859.23275.827556.5635111.48139.3036364.30176.4446910.2872
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2023055
(v2.0)		Vps39269338
600/4100.0364409/410-0.119477/4101.1649176/4100.11068/410-3.466358/410-3.3872
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2023055
(v2.0)		Vps39269338
254/1650.1089167/165-0.098271/1652.3023158/1651.2563/165-3.344530/165-2.9964
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2023055
(v2.0)		Vps39269338
65.005310462.51
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2023055
(v2.0)		Vps39269338
18.30075533.27
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A