DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0000837

Gene

4732418C07Rik

Synonyms

Kiaa0494

Description

RIKEN cDNA 4732418C07 gene

Locus

NM_172698 UCSC: chr4:115410678-115449932(+) OLP: chr4:115410678-115449932(+)

DB links

Entrez 230648
MGI 2442397
Ensembl ENSMUSG00000034210
Vega OTTMUSG00000008688

Feature

protein-coding

GO_BP

GO_MF

GO_CC

KEGG

see (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0000837 (v1.0)	4732418C07Rik	NM_172698	230648	46.4545	49.7542	13.3627	5.54266	10.5451

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0000837 (v1.0)	4732418C07Rik	NM_172698	230648	48.5725	2.65282	54.2829

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0000837 (v1.0)	4732418C07Rik	NM_172698	230648	47.4115	49.2546	42.6301

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0000837 (v1.0)	4732418C07Rik	NM_172698	230648	48.6007	2.61648	46.7553

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0000837 (v1.0)	4732418C07Rik	NM_172698	230648	12.3718	5.35166	6.34198

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0000837 (v1.0)	4732418C07Rik	NM_172698	230648	23.4256	15.9997

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0000837 (v1.0)	4732418C07Rik	NM_172698	230648	28.2858	41.8725

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0000837 (v1.0)	5588	H3003D10-3	Mm.34028	LOC230648	230648	U042568	NAP092500-001		TC936230,TC936228		U,F,2	3.8745	3.7627	3.1001	3.1618	2.5675	2.8399	2.8072
0000837 (v1.0)	14701	J0801A04-3	Mm.34028	LOC230648	230648		NAP023161-001					3.5785	3.4283	3.3624	3.3085	3.8413	3.6019	3.7637

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0000837 (v1.0)	1427978_at	Mm.283565	4732418C07Rik	NM_172698.2	230648	142.85	288.8	146.5	0	0
0000837 (v1.0)	1433875_at	Mm.283565	4732418C07Rik	NM_172698.2	230648	1585.93	2321.02	769.15	444.925	887.825

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0000837 (v1.0)	A_51_P157297	4732418C07Rik	AK080626	230648	1	1	P	1.501	0.153	P
0000837 (v1.0)	A_52_P390345	4732418C07Rik	NM_172698	230648	1	1	P	1.623	0.129	P
0000837 (v1.0)	A_52_P685938	4732418C07Rik	NM_172698	230648	1	1	P	1.295	0.234	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0000837 (v1.0)	4732418C07Rik	230648	1	1	0	1	1	0