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DB status: OK
Last modified: 2024/03/24

Gene Search:

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DBTMEE:0001955

Gene	Abi1
Synonyms	E3B1 Ssh3bp1
Description	abl-interactor 1
Locus	NM_145994 UCSC: chr2:22795509-22895760(-) OLP: chr2:22795509-22895760(-) NM_007380 UCSC: chr2:22795509-22895760(-) OLP: chr2:22795509-22895760(-) NM_001077190 UCSC: chr2:22795509-22895760(-) OLP: chr2:22795509-22895760(-) NM_001077193 UCSC: chr2:22795509-22895760(-) OLP: chr2:22795509-22895760(-) NM_001077192 UCSC: chr2:22795509-22895760(-) OLP: chr2:22795509-22895760(-)
DB links	Entrez 11308 MGI 104913 Ensembl ENSMUSG00000058835 Vega OTTMUSG00000016621
Feature	protein-coding
GO_BP	7 Terms somitogenesis (GO:0001756) cellular component movement (GO:0006928) cellular process (GO:0009987) peptidyl-tyrosine phosphorylation (GO:0018108) megakaryocyte development (GO:0035855) positive regulation of protein tyrosine kinase activity (GO:0061098) lamellipodium morphogenesis (GO:0072673)
GO_MF	2 Terms protein binding (GO:0005515) protein tyrosine kinase activator activity (GO:0030296)
GO_CC	11 Terms intracellular (GO:0005622) nucleus (GO:0005634) cytoplasm (GO:0005737) cytoskeleton (GO:0005856) lamellipodium (GO:0030027) cell junction (GO:0030054) filopodium (GO:0030175) cell leading edge (GO:0031252) cell projection (GO:0042995) neuron projection (GO:0043005) synapse (GO:0045202)
KEGG
Ver2_FPKM	see  (v2.0)
SPR_Histone_Erkek_5KaroundTSS	N/A
SPR_Histone_Erkek_2KaroundTSS	N/A
SPR_Methy_Kobayashi_5KaroundTSS	N/A
SPR_Methy_Kobayashi_2KaroundTSS	N/A
SOLiD_OocyteTo4C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez SPR_FPKM Oo_FPKM 1C_FPKM 2C_FPKM 4C_FPKM MEF_FPKM 0001955 (v1.0) Abi1 NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_145994 11308 69.1157 73.6458 47.4855 22.7124 18.948
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM SPR_FPKM 1C_FPKM 0001955 (v1.0) Abi1 NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_145994 11308 72.2668 7.8965 80.3491
SOLiD_Partheno1C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM 1C_FPKM p1C_FPKM 0001955 (v1.0) Abi1 NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_145994 11308 70.5396 72.9063 61.573
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM SPR_FPKM p1C_FPKM 0001955 (v1.0) Abi1 NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_145994 11308 72.3088 7.78834 67.5311
SOLiD_Partheno4C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez 2C_FPKM 4C_FPKM p4C_FPKM 0001955 (v1.0) Abi1 NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_145994 11308 43.9642 21.9297 19.2521
Illumina_Oo_2C_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_FPKM 2C_FPKM 0001955 (v1.0) Abi1 NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_145994 11308 153.709 15.1312
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided	DBTMEE Gene RefSeq Entrez Oo_1_1 Oo_2_1 0001955 (v1.0) Abi1 NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_145994 11308 16.1064 36.3886
NIA60mer	DBTMEE Array_Feature_Number Oligo_Parent_Clone Unigene Gene Entrez U_Cluster NAP_Cluster Gene_U/NAP TIGR SwissProt EST Oo 1C 2C 4C 8C Morula Blastocyst 0001955 (v1.0) 4977 G0117D04-3 Mm.695 Ssh3bp1 11308 U022352 NAP104484-1 Ssh3bp1; TC919368,TC911814,TC869768,TC828675 Q60747 U,F,2 3.4851 3.3626 2.99 3.1115 2.621 2.8612 2.9463 0001955 (v1.0) 16425 K0416F07-3 Mm.695 Ssh3bp1 11308 U022352 NAP120956-001 Ssh3bp1; TC919368,TC911814,TC869768,TC828675 Q60747 U,F,2 3.6243 3.4777 2.9097 2.9298 2.8458 2.8864 2.8977
MOE430	DBTMEE Probe_ID Unigene Gene RefSeq Entrez Oo 1C 2C 8C Blastocyst 0001955 (v1.0) 1450890_a_at Mm.205647 Abi1 NM_001077190.1,NM_145994.1,NM_007380.2,NM_001077192.1,NM_001077193.1 11308 333.55 428.175 289.425 97.4 120.525 0001955 (v1.0) 1438506_s_at Mm.205647 Abi1 NM_001077190.1,NM_145994.1,NM_007380.2,NM_001077192.1,NM_001077193.1 11308 82.625 110.575 105.125 78.85 71.925
Agilent44K	DBTMEE Probe_ID Gene Acc Entrez Oo1_xFold Oo1_pVal Oo1_Flag Oo2_xFold Oo2_pVal Oo2_Flag 0001955 (v1.0) A_51_P392963 Abi1 NM_007380 11308 1 1 P 0.456 0.0804 P
Proteome	DBTMEE Gene Entrez GV_seqCount MII_seqCount Zygote_seqCount GV_specCount MII_specCount Zygote_specCount 0001955 (v1.0) Abi1 11308 0.8 1 0 1.6 1 0