DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0002297

Gene

Ahctf1

Synonyms

Elys

Description

AT hook containing transcription factor 1

Locus

NM_026375 UCSC: chr1:181675035-181734146(-) OLP: chr1:181675035-181734146(-)

DB links

Entrez 226747
MGI 1915033
Ensembl ENSMUSG00000026491
Vega OTTMUSG00000033771

Feature

protein-coding

GO_BP

13 Terms

GO_MF

2 Terms

GO_CC

8 Terms

KEGG

see DBTMEE:2002179 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0002297 (v1.0)	Ahctf1	NM_026375	226747	28.2426	36.2452	82.8549	65.6982	15.0011

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0002297 (v1.0)	Ahctf1	NM_026375	226747	29.5302	3.38612	39.5443

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0002297 (v1.0)	Ahctf1	NM_026375	226747	28.8244	35.8812	28.1807

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0002297 (v1.0)	Ahctf1	NM_026375	226747	29.5474	3.33974	30.9077

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0002297 (v1.0)	Ahctf1	NM_026375	226747	76.7108	63.4342	60.1277

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0002297 (v1.0)	Ahctf1	NM_026375	226747	18.9109	39.5202

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0002297 (v1.0)	Ahctf1	NM_026375	226747	11.661	11.5952

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0002297 (v1.0)	1169	C0182H01-3	Mm.128165	6230412P20Rik	226747	U022135	NAP004558-001	Elys;	TC936581		U,F,2	2.9959	2.8633	2.4403	3.1421	2.5176	2.6738	2.6076
0002297 (v1.0)	16590	K0432D08-3	Mm.128165	6230412P20Rik	226747	U022135	NAP004558-001	Elys;	TC936582,TC936581,TC859592,TC859589		U,F,2	3.7362	3.7249	3.5771	3.8504	2.6991	2.9262	2.7625

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0002297 (v1.0)	1424712_at	Mm.128165	Ahctf1	NM_026375.2	226747	254.875	708.65	815.75	338.025	188.175
0002297 (v1.0)	1438816_at	Mm.128165	Ahctf1	NM_026375.2	226747	0	0	200.1	289.775	176.3
0002297 (v1.0)	1446472_at	Mm.128165	Ahctf1	NM_026375.2	226747	0	0	0	0	184.475

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0002297 (v1.0)	A_51_P118763	Ahctf1	NM_026375	226747	1	1	P	1.247	0.27	P
0002297 (v1.0)	A_52_P6338	Ahctf1	BC023122	226747	1	1	P	0.689	0.217	P

N/A