DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0002667

Gene

Apex1

Synonyms

HAP1
Ref-1

Description

apurinic/apyrimidinic endonuclease 1

Locus

NM_009687 UCSC: chr14:51544624-51546863(+) OLP: chr14:51544624-51546863(+)

DB links

Entrez 11792
MGI 88042
Ensembl ENSMUSG00000035960
Vega OTTMUSG00000019767

Feature

protein-coding

GO_BP

14 Terms

GO_MF

18 Terms

GO_CC

11 Terms

KEGG

1 Terms

see DBTMEE:2002557 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0002667 (v1.0)	Apex1	NM_009687	11792	44.2722	25.8085	61.9682	102.124	68.6917

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0002667 (v1.0)	Apex1	NM_009687	11792	46.2907	15.334	28.1576

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0002667 (v1.0)	Apex1	NM_009687	11792	45.1843	25.5494	24.2374

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0002667 (v1.0)	Apex1	NM_009687	11792	46.3176	15.124	26.5828

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0002667 (v1.0)	Apex1	NM_009687	11792	57.3729	98.6051	101.658

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0002667 (v1.0)	Apex1	NM_009687	11792	12.8741	19.3894

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0002667 (v1.0)	Apex1	NM_009687	11792	4.47524	3.8485

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0002667 (v1.0)	361	C0102G12-3	Mm.203	Apex1	11792	U015575	NAP097900-001		TC830559,TC830558,TC830556,TC830551	P28352	U,F,2	3.7903	3.8755	4.2966	4.3941	4.191	4.3002	4.212

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0002667 (v1.0)	1416135_at	Mm.203	Apex1	NM_009687.2	11792	344.875	134.2	374.725	1411.4	764.425
0002667 (v1.0)	1456079_x_at	Mm.203	Apex1	NM_009687.2	11792	632.15	0	537.725	1519.78	1243.43
0002667 (v1.0)	1437715_x_at	Mm.203	Apex1	NM_009687.2	11792	751.025	0	624.825	2842.45	1878.3

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0002667 (v1.0)	A_51_P473576	Apex1	NM_009687	11792	1	1	P	0.97	0.831	P

N/A