DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0002721

Gene

Appbp2

Synonyms

PAT1

Description

amyloid beta precursor protein (cytoplasmic tail) binding protein 2

Locus

NM_025825 UCSC: chr11:85004812-85048622(-) OLP: chr11:85004812-85048622(-)

DB links

Entrez 66884
MGI 1914134
Ensembl ENSMUSG00000018481
Vega OTTMUSG00000001027

Feature

protein-coding

GO_BP

3 Terms

GO_MF

2 Terms

GO_CC

6 Terms

KEGG

see DBTMEE:2002611 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0002721 (v1.0)	Appbp2	NM_025825	66884	21.1739	18.7912	78.2084	66.9969	20.2782

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0002721 (v1.0)	Appbp2	NM_025825	66884	22.1393	3.49449	20.5016

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0002721 (v1.0)	Appbp2	NM_025825	66884	21.6101	18.6025	19.5676

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0002721 (v1.0)	Appbp2	NM_025825	66884	22.1522	3.44663	21.4611

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0002721 (v1.0)	Appbp2	NM_025825	66884	72.4088	64.6882	66.7306

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0002721 (v1.0)	Appbp2	NM_025825	66884	9.17077	58.1853

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0002721 (v1.0)	Appbp2	NM_025825	66884	1.04577	1.20181

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0002721 (v1.0)	3758	C0882G10-3	Mm.36365	1300003O07Rik	66884	U033215	NAP121894-001	1300003O07Rik;	TC805335	Q9CUT5	U,F,2	3.1808	3.1215	3.0627	2.9976	3.3141	3.0671	3.2433
0002721 (v1.0)	18328	L0201A11-3	Mm.36365	1300003O07Rik	66884	U033215	NAP121894-001	1300003O07Rik;	TC914894	Q9CUT5	U,F,2	3.4932	3.5548	3.5583	3.8896	3.4457	3.6153	3.4679

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0002721 (v1.0)	1451251_at	Mm.271997	Appbp2	NM_025825.3	66884	334.025	288.225	781.725	835	428.275
0002721 (v1.0)	1430265_at	Mm.271997	Appbp2	NM_025825.3	66884	88.575	145.3	95.875	0	0
0002721 (v1.0)	1434039_at	Mm.271997	Appbp2	NM_025825.3	66884	90.075	99.9	50.85	397.075	408.95

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0002721 (v1.0)	A_51_P459368	Appbp2	NM_025825	66884	1	1	P	0.632	0.136	P
0002721 (v1.0)	A_52_P285058	Appbp2	AK122222	66884	1	1	P	0.48	0.0977	P
0002721 (v1.0)	A_52_P400637	Appbp2	AK085477	66884	1	1	P	0.957	0.809	P
0002721 (v1.0)	A_52_P539270	Appbp2	NM_025825	66884	1	1	P	0.465	0.116	P

N/A