DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0002780

Gene

Arhgap29

Synonyms

C76601
Parg1

Description

Rho GTPase activating protein 29

Locus

NM_172525 UCSC: chr3:121656244-121719071(+) OLP: chr3:121656244-121719071(+)

DB links

Entrez 214137
MGI 2443818
Ensembl ENSMUSG00000039831
Vega OTTMUSG00000026603

Feature

protein-coding

GO_BP

2 Terms

GO_MF

3 Terms

GO_CC

1 Terms

KEGG

see DBTMEE:2002674 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0002780 (v1.0)	Arhgap29	NM_172525	214137	25.9742	37.8195	90.701	35.7449	12.9066

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0002780 (v1.0)	Arhgap29	NM_172525	214137	27.1584	1.26873	41.2619

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0002780 (v1.0)	Arhgap29	NM_172525	214137	26.5093	37.4398	27.1761

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0002780 (v1.0)	Arhgap29	NM_172525	214137	27.1741	1.25136	29.8058

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0002780 (v1.0)	Arhgap29	NM_172525	214137	83.975	34.5132	31.802

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0002780 (v1.0)	Arhgap29	NM_172525	214137	16.946	64.5854

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0002780 (v1.0)	Arhgap29	NM_172525	214137	3.68455	8.03557

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0002780 (v1.0)	12101	H3133F07-3	Mm.30264	A830014I19	214137	U042478	NAP002763-001		TC805221		U,F,2	3.5014	3.5773	3.1456	3.4626	3.0163	3.0336	3.0636

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0002780 (v1.0)	1441618_at	Mm.229287	Arhgap29	NM_172525.2	214137	0	0	21.075	0	0
0002780 (v1.0)	1454745_at	Mm.229287	Arhgap29	NM_172525.2	214137	1740.2	1961.12	2916.98	2127.85	1311.22
0002780 (v1.0)	1444512_at	Mm.229287	Arhgap29	NM_172525.2	214137	0	0	152.9	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0002780 (v1.0)	A_51_P367947	Arhgap29	NM_172525	214137	1	1	P	0.293	0.0736	P
0002780 (v1.0)	A_52_P325443	Arhgap29	NM_172525	214137	1	1	P	0.357	0.0634	P

N/A