DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0002828

Gene

Arid4a

Synonyms

Rbbp1

Description

AT rich interactive domain 4A (RBP1-like)

Locus

NM_001081195 UCSC: chr12:72116954-72200338(+) OLP: chr12:72116954-72200338(+)

DB links

Entrez 238247
MGI 2444354
Ensembl ENSMUSG00000048118
Vega OTTMUSG00000017260

Feature

protein-coding

GO_BP

6 Terms

GO_MF

GO_CC

2 Terms

KEGG

see DBTMEE:2002725 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0002828 (v1.0)	Arid4a	NM_001081195	238247	5.9939	4.50886	7.60747	3.66813	1.23562

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0002828 (v1.0)	Arid4a	NM_001081195	238247	6.26718	1.45839	4.91926

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0002828 (v1.0)	Arid4a	NM_001081195	238247	6.11738	4.46358	4.52948

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0002828 (v1.0)	Arid4a	NM_001081195	238247	6.27082	1.43841	4.96778

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0002828 (v1.0)	Arid4a	NM_001081195	238247	7.04333	3.54173	3.18141

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0002828 (v1.0)	Arid4a	NM_001081195	238247	38.087	4.71231

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0002828 (v1.0)	Arid4a	NM_001081195	238247	4.61784	8.44593

N/A

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0002828 (v1.0)	1436191_at	Mm.241601	Arid4a	NM_001081195.1	238247	241.025	143.35	454.825	127.075	75.425
0002828 (v1.0)	1456420_at	Mm.241601	Arid4a	NM_001081195.1	238247	141.175	332.025	170.65	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0002828 (v1.0)	A_51_P156927	Arid4a	XM_354675	238247	1	1	P	0.0268	0.021	P
0002828 (v1.0)	A_51_P274274	Arid4a	AK087354	238247	1	1	P	0.456	0.0825	P
0002828 (v1.0)	A_52_P462171	Arid4a	XM_354675	238247	1	1	P	0.241	0.0449	P

N/A