DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0003027

Gene

Atox1

Synonyms

ATX1

Description

ATX1 (antioxidant protein 1) homolog 1 (yeast)

Locus

NM_009720 UCSC: chr11:55260145-55274640(-) OLP: chr11:55260145-55274640(-)

DB links

Entrez 11927
MGI 1333855
Ensembl ENSMUSG00000018585
Vega OTTMUSG00000005691

Feature

protein-coding

GO_BP

6 Terms

GO_MF

4 Terms

GO_CC

KEGG

1 Terms

see DBTMEE:2002932 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0003027 (v1.0)	Atox1	NM_009720	11927	24.5368	10.0523	28.7607	35.9944	53.9851

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0003027 (v1.0)	Atox1	NM_009720	11927	25.6554	156.488	10.9673

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0003027 (v1.0)	Atox1	NM_009720	11927	25.0423	9.95137	11.056

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0003027 (v1.0)	Atox1	NM_009720	11927	25.6704	154.345	12.1258

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0003027 (v1.0)	Atox1	NM_009720	11927	26.628	34.7541	38.9729

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0003027 (v1.0)	Atox1	NM_009720	11927	5.18061	9.72671

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0003027 (v1.0)	Atox1	NM_009720	11927	12.4422	12.3811

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0003027 (v1.0)	12951	H3155F02-5		Atox1	11927	U032791	NAP012035-001	Atox1;	TC930634,TC930633,TC930632,TC930631	O08997	U,F,2	4.1388	4.082	4.0977	4.3616	4.5335	4.5183	4.6296

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0003027 (v1.0)	1460639_a_at	Mm.217759	Atox1	NM_009720.2	11927	484.05	0	0	624.525	802.175
0003027 (v1.0)	1415760_s_at	Mm.217759	Atox1	NM_009720.2	11927	297.15	0	172.1	420.075	610.675
0003027 (v1.0)	1446802_at	Mm.217759	Atox1	NM_009720.2	11927	0	0	145.75	255.3	191.15

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0003027 (v1.0)	A_51_P346153	Atox1	NM_009720	11927	1	1	P	0.909	0.516	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0003027 (v1.0)	Atox1	11927	3	5	2	5	17	3