DBTMEE

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DBTMEE:0003330

Gene

BC057079

Synonyms

Focad

Description

focadhesin

Locus

NM_001081184 UCSC: chr4:87740534-88056915(+) OLP: chr4:87740534-88056915(+)

DB links

Entrez 230393
MGI 2676921
Ensembl ENSMUSG00000038368
Vega OTTMUSG00000019865

Feature

protein-coding

GO_BP

GO_MF

GO_CC

KEGG

Ver2_FPKM

see (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0003330 (v1.0)	BC057079	NM_001081184	230393	20.8058	26.1417	40.9918	34.7791	5.3267

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0003330 (v1.0)	BC057079	NM_001081184	230393	21.7544	1.47378	28.5212

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0003330 (v1.0)	BC057079	NM_001081184	230393	21.2344	25.8792	24.962

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0003330 (v1.0)	BC057079	NM_001081184	230393	21.767	1.45359	27.3775

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0003330 (v1.0)	BC057079	NM_001081184	230393	37.952	33.5806	30.208

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0003330 (v1.0)	BC057079	NM_001081184	230393	2.66087	14.5871

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0003330 (v1.0)	BC057079	NM_001081184	230393	1.29154	1.98955

NIA60mer

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0003330 (v1.0)	3905	C0906A05-3	Mm.23873		230393	U004478	NAP002160-001	LOC230393	TC887976,TC887975		U,F,2	2.8574	2.9429	2.8242	2.6785	2.872	2.7585	2.8049

MOE430

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0003330 (v1.0)	1435209_at	Mm.287210	BC057079	NM_001081184.1	230393	673.1	0	0	0	389.65

Agilent44K

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0003330 (v1.0)	A_52_P202276	BC057079	AK122556	230393	1	1	P	0.594	0.202	P

Proteome

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0003330 (v1.0)	BC057079	230393	2	5	0	2	8	0