DBTMEE:0003590
| Gene | Brcc3 |
| Synonyms | C6.1A |
| Description | BRCA1/BRCA2-containing complex, subunit 3 |
| Locus | NM_145956 UCSC: chrX:72661967-72699340(+) OLP: chrX:72661967-72699340(+)
NM_001166459 UCSC: chrX:72661967-72701040(+) OLP: chrX:72661967-72701040(+)
NM_001166457 UCSC: chrX:72661967-72699340(+) OLP: chrX:72661967-72699340(+)
|
| DB links |
Entrez 210766
MGI 2389572
Ensembl ENSMUSG00000031201
Vega OTTMUSG00000020858
|
| Feature | protein-coding |
| GO_BP |
-
 12 Terms
|
| GO_MF |
-
8 Terms
|
| GO_CC |
-
5 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2003472 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0003590
(v1.0) | Brcc3 | NM_001166457,NM_001166459,NM_145956 | 210766
| 11.947 | 11.6463 | 4.23705 | 5.07067 | 12.4341 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0003590
(v1.0) | Brcc3 | NM_001166457,NM_001166459,NM_145956 | 210766
| 12.4917 | 4.24968 | 12.7064 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0003590
(v1.0) | Brcc3 | NM_001166457,NM_001166459,NM_145956 | 210766
| 12.1932 | 11.5294 | 10.9094 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0003590
(v1.0) | Brcc3 | NM_001166457,NM_001166459,NM_145956 | 210766
| 12.499 | 4.19147 | 11.9651 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0003590
(v1.0) | Brcc3 | NM_001166457,NM_001166459,NM_145956 | 210766
| 3.92285 | 4.89593 | 8.58232 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0003590
(v1.0) | Brcc3 | NM_001166457,NM_001166459,NM_145956 | 210766
| 6.39524 | 9.66712 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0003590
(v1.0) | Brcc3 | NM_001166457,NM_001166459,NM_145956 | 210766
| 1.56622 | 1.73104 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0003590
(v1.0) | 1578 | C0229C01-3 | | C6.1A-pending | 210766
| U041814 | NAP027198-1 | C6.1A;Tcra; | TC869974,TC869972,TC827461,TC816283 | P46737 | | 3.202 | 3.1516 | 3.1478 | 3.1155 | 3.1067 | 3.2032 | 3.1698 |
0003590
(v1.0) | 1609 | C0233A05-3 | Mm.226957 | C6.1A-pending | 210766
| | | C6.1A-pending | | | | 2.6629 | 2.8753 | 3.0436 | 2.8348 | 2.6384 | 2.9293 | 2.8243 |
0003590
(v1.0) | 12082 | H3132F07-3 | Mm.226957 | C6.1A-pending | 210766
| U003483 | NAP037507-1 | 4933434E20Rik;5730552F22Rik; | TC888748 | Q9D9D9 | U,F,2 | 3.294 | 3.2206 | 3.1572 | 3.0847 | 3.5591 | 3.3233 | 3.4577 |
0003590
(v1.0) | 14244 | J0427G04-3 | Mm.226957 | C6.1A-pending | 210766
| | | | | | | 3.2918 | 3.1168 | 3.2682 | 3.1458 | 3.4641 | 3.3144 | 3.3508 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0003590
(v1.0) | 1452128_a_at | Mm.226957 | Brcc3 | NM_001166457.1,NM_145956.4,NM_001166459.1 | 210766
| 272.525 | 164.7 | 0 | 175.85 | 292.625 |
0003590
(v1.0) | 1437553_at | Mm.226957 | Brcc3 | NM_001166457.1,NM_145956.4,NM_001166459.1 | 210766
| 0 | 0 | 0 | 0 | 26.35 |
0003590
(v1.0) | 1447778_x_at | Mm.226957 | Brcc3 | NM_001166457.1,NM_145956.4,NM_001166459.1 | 210766
| 1251.6 | 0 | 0 | 0 | 0 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0003590
(v1.0) | A_51_P373461 | MGI:2389572 | NM_145956 | 210766
| 1 | 1 | P | 1.097 | 0.62 | P |
|
| Proteome |
N/A |
