DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0004384

Gene

Cdc7

Synonyms

Cdc7
Cdc7l1
muCdc7

Description

cell division cycle 7 (S. cerevisiae)

Locus

NM_009863 UCSC: chr5:107393341-107413458(+) OLP: chr5:107393341-107413458(+)
NM_001271568 UCSC: chr5:107393341-107413458(+) OLP: chr5:107393341-107413458(+)
NM_001271567 UCSC: chr5:107393341-107413458(+) OLP: chr5:107393341-107413458(+)
NM_001271566 UCSC: chr5:107393580-107413458(+) OLP: chr5:107393580-107413458(+)

DB links

Entrez 12545
MGI 1309511
Ensembl ENSMUSG00000029283
Vega OTTMUSG00000028130

Feature

protein-coding

GO_BP

6 Terms

GO_MF

8 Terms

GO_CC

2 Terms

KEGG

1 Terms

see DBTMEE:2004273 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0004384 (v1.0)	Cdc7	NM_009863	12545	16.5894	22.1022	15.2985	14.4066	12.7814

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0004384 (v1.0)	Cdc7	NM_009863	12545	17.3457	0.224878	24.114

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0004384 (v1.0)	Cdc7	NM_009863	12545	16.9312	21.8803	21.2124

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0004384 (v1.0)	Cdc7	NM_009863	12545	17.3558	0.221798	23.265

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0004384 (v1.0)	Cdc7	NM_009863	12545	14.164	13.9102	11.8734

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0004384 (v1.0)	Cdc7	NM_009863	12545	6.98639	8.68271

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0004384 (v1.0)	Cdc7	NM_009863	12545	15.3391	15.8487

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0004384 (v1.0)	3846	C0903B05-3	Mm.20842	Cdc7l1	12545	U005923	NAP006902-001	Cdc7l1;	TC899429	Q9WUV1	U,F,2	3.2661	3.0655	3.022	3.2196	2.625	2.8656	2.7788

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0004384 (v1.0)	1426002_a_at	Mm.20842	Cdc7	NM_009863.2	12545	273.45	477.575	220.05	306.75	252.65

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0004384 (v1.0)	A_51_P206616	Cdc7	NM_009863	12545	1	1	P	0.373	0.0752	P

N/A