DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0005121

Gene

Cpeb1

Synonyms

Description

cytoplasmic polyadenylation element binding protein 1

Locus

NM_001252525 UCSC: chr7:88491912-88599644(-) OLP: chr7:88491912-88599644(-)
NM_007755 UCSC: chr7:88491912-88599644(-) OLP: chr7:88491912-88599644(-)
NM_001252526 UCSC: chr7:88491912-88599644(-) OLP: chr7:88491912-88599644(-)

DB links

Entrez 12877
MGI 108442
Ensembl ENSMUSG00000025586
Vega OTTMUSG00000024594

Feature

protein-coding

GO_BP

4 Terms

GO_MF

5 Terms

GO_CC

7 Terms

KEGG

3 Terms

see DBTMEE:2005054 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0005121 (v1.0)	Cpeb1	NM_007755	12877	102.859	44.5778	11.3384	5.28408	1.40719

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0005121 (v1.0)	Cpeb1	NM_007755	12877	107.548	1.1354	48.6353

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0005121 (v1.0)	Cpeb1	NM_007755	12877	104.978	44.1302	34.0452

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0005121 (v1.0)	Cpeb1	NM_007755	12877	107.611	1.11985	37.3397

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0005121 (v1.0)	Cpeb1	NM_007755	12877	10.4976	5.10199	6.59965

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0005121 (v1.0)	Cpeb1	NM_007755	12877	62.7708	2.46167

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0005121 (v1.0)	Cpeb1	NM_007755	12877	8.8641	24.0564

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0005121 (v1.0)	14325	J0446G04-3	Mm.22062	Cpeb	12877	U028778	NAP008113-001	Cpeb;	TC905381	P70166	U,F,2	3.7183	3.5548	3.1975	3.2168	2.8162	2.87	2.8497

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0005121 (v1.0)	1417960_at	Mm.273122	Cpeb1	NM_007755.4	12877	1014.42	748.975	88.025	0	20.225

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0005121 (v1.0)	A_52_P462296	Cpeb1	NM_007755	12877	1	1	P	0.36	0.062	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0005121 (v1.0)	Cpeb1	12877	17.67	2	0	30.67	3	0