DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:


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DBTMEE:0005253
GeneCsda
SynonymsdbpA
Dpba
MSY3
MSY4
oxyR
Yb2
Ybx3
Descriptioncold shock domain protein A
LocusNM_139117 UCSC: chr6:131314876-131338468(-) OLP: chr6:131314876-131338468(-)
NM_011733 UCSC: chr6:131314876-131338468(-) OLP: chr6:131314876-131338468(-)
DB links


Entrez 56449
MGI 2137670
Ensembl ENSMUSG00000030189
Featureprotein-coding
GO_BP
  •   10 Terms
GO_MF
GO_CC
KEGG
Ver2_FPKM see  (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0005253
(v1.0)
CsdaNM_011733,NM_13911756449
293.308241.88435.3751103.9759.9621
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0005253
(v1.0)
CsdaNM_011733,NM_13911756449
306.6844.7085263.901
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0005253
(v1.0)
CsdaNM_011733,NM_13911756449
299.351239.456352.456
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0005253
(v1.0)
CsdaNM_011733,NM_13911756449
306.85944.0961386.562
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0005253
(v1.0)
CsdaNM_011733,NM_13911756449
32.7518100.38794.56
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0005253
(v1.0)
CsdaNM_011733,NM_13911756449
255.3757.1998
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0005253
(v1.0)
CsdaNM_011733,NM_13911756449
12.25116.6943
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0005253
(v1.0)
1041C0174E06-3Mm.31213U027935NAP032870-1Csda;Q61478U,F,22.88452.9643.13133.05542.89453.09392.9762
0005253
(v1.0)
18573L0215E11-3Mm.193526Csda56449
U027935NAP001708-002Csda;TC935246,TC826815Q61478U,F,23.42373.38983.20263.47873.41573.72773.7226
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0005253
(v1.0)
1451012_a_atMm.458000CsdaNM_139117.2,NM_011733.256449
350.4336.125336.7292.525472.55
0005253
(v1.0)
1435800_a_atMm.458000CsdaNM_139117.2,NM_011733.256449
2038.11552.972867.771577.051741.38
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0005253
(v1.0)
Csda56449
24171121112626