DBTMEE:0005253
| Gene | Csda |
| Synonyms | dbpA
Dpba
MSY3
MSY4
oxyR
Yb2
Ybx3 |
| Description | cold shock domain protein A |
| Locus | NM_139117 UCSC: chr6:131314876-131338468(-) OLP: chr6:131314876-131338468(-)
NM_011733 UCSC: chr6:131314876-131338468(-) OLP: chr6:131314876-131338468(-)
|
| DB links |
Entrez 56449
MGI 2137670
Ensembl ENSMUSG00000030189
|
| Feature | protein-coding |
| GO_BP |
-
 10 Terms
|
| GO_MF |
-
6 Terms
|
| GO_CC |
-
5 Terms
|
| KEGG |
-
1 Terms
|
| Ver2_FPKM |
see (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0005253
(v1.0) | Csda | NM_011733,NM_139117 | 56449
| 293.308 | 241.884 | 35.3751 | 103.97 | 59.9621 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0005253
(v1.0) | Csda | NM_011733,NM_139117 | 56449
| 306.68 | 44.7085 | 263.901 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0005253
(v1.0) | Csda | NM_011733,NM_139117 | 56449
| 299.351 | 239.456 | 352.456 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0005253
(v1.0) | Csda | NM_011733,NM_139117 | 56449
| 306.859 | 44.0961 | 386.562 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0005253
(v1.0) | Csda | NM_011733,NM_139117 | 56449
| 32.7518 | 100.387 | 94.56 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0005253
(v1.0) | Csda | NM_011733,NM_139117 | 56449
| 255.37 | 57.1998 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0005253
(v1.0) | Csda | NM_011733,NM_139117 | 56449
| 12.251 | 16.6943 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0005253
(v1.0) | 1041 | C0174E06-3 | Mm.31213 | | | U027935 | NAP032870-1 | Csda; | | Q61478 | U,F,2 | 2.8845 | 2.964 | 3.1313 | 3.0554 | 2.8945 | 3.0939 | 2.9762 |
0005253
(v1.0) | 18573 | L0215E11-3 | Mm.193526 | Csda | 56449
| U027935 | NAP001708-002 | Csda; | TC935246,TC826815 | Q61478 | U,F,2 | 3.4237 | 3.3898 | 3.2026 | 3.4787 | 3.4157 | 3.7277 | 3.7226 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0005253
(v1.0) | 1451012_a_at | Mm.458000 | Csda | NM_139117.2,NM_011733.2 | 56449
| 350.4 | 336.125 | 336.7 | 292.525 | 472.55 |
0005253
(v1.0) | 1435800_a_at | Mm.458000 | Csda | NM_139117.2,NM_011733.2 | 56449
| 2038.1 | 1552.97 | 2867.77 | 1577.05 | 1741.38 |
|
| Agilent44K |
N/A |
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0005253
(v1.0) | Csda | 56449
| 24 | 17 | 11 | 211 | 126 | 26 |
|
