DBTMEE:0005255
| Gene | Csde1 |
| Synonyms | D3Jfr1
unr |
| Description | cold shock domain containing E1, RNA binding |
| Locus | NM_001161854 UCSC: chr3:102824469-102862112(+) OLP: chr3:102824469-102862112(+)
NM_144901 UCSC: chr3:102824469-102862112(+) OLP: chr3:102824469-102862112(+)
|
| DB links |
Entrez 229663
MGI 92356
Ensembl ENSMUSG00000068823
|
| Feature | protein-coding |
| GO_BP |
-
 1 Terms
regulation of transcription, DNA-dependent (GO:0006355)
|
| GO_MF |
-
3 Terms
|
| GO_CC |
-
2 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2005189 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0005255
(v1.0) | Csde1 | NM_001161854,NM_144901 | 229663
| 140.278 | 170.361 | 168.632 | 230.511 | 66.3984 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0005255
(v1.0) | Csde1 | NM_001161854,NM_144901 | 229663
| 146.674 | 34.65 | 185.868 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0005255
(v1.0) | Csde1 | NM_001161854,NM_144901 | 229663
| 143.168 | 168.65 | 146.997 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0005255
(v1.0) | Csde1 | NM_001161854,NM_144901 | 229663
| 146.759 | 34.1754 | 161.222 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0005255
(v1.0) | Csde1 | NM_001161854,NM_144901 | 229663
| 156.127 | 222.567 | 205.271 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0005255
(v1.0) | Csde1 | NM_001161854,NM_144901 | 229663
| 211.434 | 242.977 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0005255
(v1.0) | Csde1 | NM_001161854,NM_144901 | 229663
| 52.6508 | 78.3728 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0005255
(v1.0) | 6441 | H3025B12-3 | Mm.11204 | D3Jfr1 | 229663
| U003654 | NAP098625-001 | D3Jfr1;MGC19174;unr; | TC877068,TC841191,TC841189 | Q91W50 | U,F,2 | 3.9603 | 3.911 | 3.9415 | 4.3433 | 3.576 | 3.848 | 3.6799 |
0005255
(v1.0) | 11934 | H3128B12-5 | | D3Jfr1 | 229663
| U003654 | NAP098625-001 | D3Jfr1;MGC19174;unr; | TC841204,TC841195,TC841192,TC841189 | Q91W50 | U,F,2 | 2.9394 | 2.9217 | 2.9301 | 2.8412 | 3.0179 | 2.8903 | 2.9613 |
0005255
(v1.0) | 19585 | L0283C07-3 | Mm.11204 | D3Jfr1 | 229663
| U003654 | NAP031446-1 | D3Jfr1;MGC19174;unr; | TC841191,TC841189 | Q91W50 | U,F,2 | 4.3018 | 4.3285 | 3.5659 | 3.6295 | 3.5664 | 3.5995 | 3.5506 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0005255
(v1.0) | 1427396_a_at | Mm.277713 | Csde1 | NM_144901.3,NM_001161854.1 | 229663
| 2249.15 | 2651.62 | 5196.6 | 4170.12 | 1716.1 |
0005255
(v1.0) | 1423997_at | Mm.277713 | Csde1 | NM_144901.3,NM_001161854.1 | 229663
| 315.075 | 426.45 | 753.925 | 352.875 | 274.125 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0005255
(v1.0) | A_51_P513934 | D3Jfr1 | NM_144901 | 229663
| 1 | 1 | P | 0.971 | 0.819 | P |
0005255
(v1.0) | A_52_P202455 | D3Jfr1 | NM_144901 | 229663
| 1 | 1 | P | 1.094 | 0.533 | P |
0005255
(v1.0) | A_52_P320464 | D3Jfr1 | NM_144901 | 229663
| 1 | 1 | P | 0.634 | 0.154 | P |
|
| Proteome |
N/A |
