DBTMEE:0005860
| Gene | Ddx6 |
| Synonyms | HLR2
mRCK/P54
p54
rck |
| Description | DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 |
| Locus | NM_007841 UCSC: chr9:44412975-44448814(+) OLP: chr9:44412975-44448814(+)
NM_001110826 UCSC: chr9:44412975-44448814(+) OLP: chr9:44412975-44448814(+)
NM_181324 UCSC: chr9:44412975-44448814(+) OLP: chr9:44412975-44448814(+)
|
| DB links |
Entrez 13209
MGI 104976
Ensembl ENSMUSG00000032097
|
| Feature | protein-coding |
| GO_BP |
-
 1 Terms
cytoplasmic mRNA processing body assembly (GO:0033962)
|
| GO_MF |
-
7 Terms
|
| GO_CC |
-
4 Terms
|
| KEGG |
-
1 Terms
|
| Ver2_FPKM |
see DBTMEE:2005785 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0005860
(v1.0) | Ddx6 | NM_001110826,NM_007841,NM_181324 | 13209
| 6.80206 | 7.12842 | 18.4859 | 15.6503 | 35.8948 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0005860
(v1.0) | Ddx6 | NM_001110826,NM_007841,NM_181324 | 13209
| 7.11218 | 13.3073 | 7.77727 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0005860
(v1.0) | Ddx6 | NM_001110826,NM_007841,NM_181324 | 13209
| 6.94219 | 7.05685 | 9.31821 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0005860
(v1.0) | Ddx6 | NM_001110826,NM_007841,NM_181324 | 13209
| 7.11631 | 13.1251 | 10.2199 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0005860
(v1.0) | Ddx6 | NM_001110826,NM_007841,NM_181324 | 13209
| 17.115 | 15.111 | 15.2712 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0005860
(v1.0) | Ddx6 | NM_001110826,NM_007841,NM_181324 | 13209
| 5.66635 | 7.67854 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0005860
(v1.0) | Ddx6 | NM_001110826,NM_007841,NM_181324 | 13209
| 1.58703 | 1.13525 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0005860
(v1.0) | 4167 | C0917H01-3 | Mm.157743 | Ddx6 | 13209
| U010397 | NAP092930-001 | Ddx6; | TC864866 | O54979 | | 3.0907 | 3.112 | 3.1025 | 3.0387 | 3.0675 | 3.0468 | 3.064 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0005860
(v1.0) | 1424598_at | Mm.267061 | Ddx6 | NM_001110826.1,NM_181324.3,NM_007841.4 | 13209
| 74.725 | 129.7 | 184.675 | 131.925 | 162.375 |
0005860
(v1.0) | 1434697_at | Mm.267061 | Ddx6 | NM_001110826.1,NM_181324.3,NM_007841.4 | 13209
| 74.075 | 121.675 | 91.7 | 137.525 | 160.025 |
0005860
(v1.0) | 1439122_at | Mm.267061 | Ddx6 | NM_001110826.1,NM_181324.3,NM_007841.4 | 13209
| 0 | 143.175 | 0 | 0 | 0 |
0005860
(v1.0) | 1447789_x_at | Mm.267061 | Ddx6 | NM_001110826.1,NM_181324.3,NM_007841.4 | 13209
| 0 | 286 | 0 | 0 | 0 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0005860
(v1.0) | A_52_P573497 | Ddx6 | NM_181324 | 13209
| 1 | 1 | P | 0.493 | 0.128 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0005860
(v1.0) | Ddx6 | 13209
| 15 | 22 | 13 | 51 | 89 | 22 |
|
