DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0005870

Gene

Def8

Synonyms

D8Ertd713e

Description

differentially expressed in FDCP 8

Locus

NM_001253784 UCSC: chr8:125966856-125987799(+) OLP: chr8:125966856-125987799(+)
NM_001253783 UCSC: chr8:125966856-125987799(+) OLP: chr8:125966856-125987799(+)
NM_054046 UCSC: chr8:125966856-125987799(+) OLP: chr8:125966856-125987799(+)
NR_045593 UCSC: chr8:125967159-125987799(+) OLP: chr8:125967159-125987799(+)

DB links

Entrez 23854
MGI 1346331
Ensembl ENSMUSG00000001482
Vega OTTMUSG00000022172

Feature

protein-coding

GO_BP

1 Terms

GO_MF

2 Terms

GO_CC

KEGG

see DBTMEE:2005795 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0005870 (v1.0)	Def8	NM_054046	23854	5.16433	5.5053	39.6063	77.8073	9.14922

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0005870 (v1.0)	Def8	NM_054046	23854	5.39978	4.81424	6.0064

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0005870 (v1.0)	Def8	NM_054046	23854	5.27072	5.45002	7.48067

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0005870 (v1.0)	Def8	NM_054046	23854	5.40292	4.7483	8.20455

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0005870 (v1.0)	Def8	NM_054046	23854	36.6692	75.1261	65.8441

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0005870 (v1.0)	Def8	NM_054046	23854	1.26047	15.062

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0005870 (v1.0)	Def8	NM_054046	23854	0.0294633	0.19763

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0005870 (v1.0)	18760	L0226D04-3	Mm.44123	Def8	23854	U009940	NAP092545-001	AI449518;Def8;	TC819285,TC819277,TC819276	Q99J78	U,F,2	3.2355	3.1713	3.4425	3.6177	3.5096	3.5515	3.4273

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0005870 (v1.0)	1415853_at	Mm.275127	Def8	NM_054046.4	23854	0	0	0	488.2	107.675

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0005870 (v1.0)	A_51_P259726	Def8	NM_054046	23854	1	1	P	1.233	0.302	P

N/A