DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0006616

Gene

Eif3a

Synonyms

Csma
Eif3
Eif3s10

Description

eukaryotic translation initiation factor 3, subunit A

Locus

NM_010123 UCSC: chr19:60837019-60866596(-) OLP: chr19:60837019-60866596(-)

DB links

Entrez 13669
MGI 95301
Ensembl ENSMUSG00000024991

Feature

protein-coding

GO_BP

3 Terms

GO_MF

2 Terms

GO_CC

5 Terms

KEGG

1 Terms

see DBTMEE:2006543 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0006616 (v1.0)	Eif3a	NM_010123	13669	6.21883	4.40959	61.371	117.227	48.7684

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0006616 (v1.0)	Eif3a	NM_010123	13669	6.50236	15.9957	4.81096

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0006616 (v1.0)	Eif3a	NM_010123	13669	6.34695	4.36531	3.92612

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0006616 (v1.0)	Eif3a	NM_010123	13669	6.50614	15.7766	4.30603

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0006616 (v1.0)	Eif3a	NM_010123	13669	56.82	113.188	103.357

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0006616 (v1.0)	Eif3a	NM_010123	13669	20.5675	96.1052

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0006616 (v1.0)	Eif3a	NM_010123	13669	4.50499	7.4187

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0006616 (v1.0)	6513	H3026D11-3	Mm.2238	Eif3	13669	U039207	NAP121130-001	Eif3;	TC863229,TC863219	P23116	U,F,2	3.1969	3.2995	3.509	3.9334	3.2324	3.9939	3.7513
0006616 (v1.0)	19110	L0247H03-3	Mm.2238	Eif3	13669	U039207	NAP121130-001	Eif3;	TC863219	P23116	U,F,2	2.6773	2.8084	2.6726	3.325	2.8758	3.1443	3.0354

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0006616 (v1.0)	1416659_at	Mm.2238	Eif3a	NM_010123.3	13669	116.025	78.575	142.2	772.9	636.075

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0006616 (v1.0)	A_51_P229280	Eif3s10	X17373	13669	1	1	P	2.106	0.0856	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0006616 (v1.0)	Eif3a	13669	6	14	2	9	17	2