DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0007128

Gene

Fam178a

Synonyms

Description

family with sequence similarity 178, member A

Locus

NM_001081225 UCSC: chr19:45005609-45058277(+) OLP: chr19:45005609-45058277(+)

DB links

Entrez 226151
MGI 1924968
Ensembl ENSMUSG00000036097

Feature

protein-coding

GO_BP

GO_MF

GO_CC

KEGG

see DBTMEE:2007062 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0007128 (v1.0)	Fam178a	NM_001081225	226151	62.2127	100.666	57.1043	18.7932	10.6517

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0007128 (v1.0)	Fam178a	NM_001081225	226151	65.0491	5.07468	109.829

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0007128 (v1.0)	Fam178a	NM_001081225	226151	63.4943	99.6552	78.2566

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0007128 (v1.0)	Fam178a	NM_001081225	226151	65.0869	5.00517	85.8292

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0007128 (v1.0)	Fam178a	NM_001081225	226151	52.8697	18.1455	18.7645

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0007128 (v1.0)	Fam178a	NM_001081225	226151	57.9708	78.146

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0007128 (v1.0)	Fam178a	NM_001081225	226151	3.49652	5.4366

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0007128 (v1.0)	9610	H3084A03-3	Mm.212609	3632432H19	226151	U019494	NAP117204-1	6030443O07Rik;	TC906011,TC848483		U,F,2	3.1897	3.2577	3.2551	3.3104	3.0903	2.9371	3.044
0007128 (v1.0)	16381	K0411D08-3	Mm.212609	3632432H19	226151	U019494	NAP121738-001	6030443O07Rik;	TC844149		U,F,2	2.8531	3.1539	2.9898	2.9389	2.6007	2.8722	2.7117

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0007128 (v1.0)	1438233_at	Mm.212609	Fam178a	NM_001081225.1	226151	342.275	712.325	595.55	168.75	195.05
0007128 (v1.0)	1445856_at	Mm.212609	Fam178a	NM_001081225.1	226151	0	0	255.6	275.8	0

N/A

N/A