DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0007446

Gene

Fen1

Synonyms

Description

flap structure specific endonuclease 1

Locus

NM_001271614 UCSC: chr19:10273622-10278433(-) OLP: chr19:10273622-10278433(-)
NM_001271615 UCSC: chr19:10273622-10278433(-) OLP: chr19:10273622-10278433(-)
NM_007999 UCSC: chr19:10273622-10278433(-) OLP: chr19:10273622-10278433(-)

DB links

Entrez 14156
MGI 102779
Ensembl ENSMUSG00000024742
Vega OTTMUSG00000034053

Feature

protein-coding

GO_BP

5 Terms

GO_MF

12 Terms

GO_CC

2 Terms

KEGG

3 Terms

see DBTMEE:2007367 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0007446 (v1.0)	Fen1	NM_007999	14156	37.8235	20.981	14.7895	16.5392	18.5237

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0007446 (v1.0)	Fen1	NM_007999	14156	39.5479	3.8788	22.8908

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0007446 (v1.0)	Fen1	NM_007999	14156	38.6027	20.7704	26.3893

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0007446 (v1.0)	Fen1	NM_007999	14156	39.5709	3.82567	28.9429

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0007446 (v1.0)	Fen1	NM_007999	14156	13.6928	15.9692	16.1107

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0007446 (v1.0)	Fen1	NM_007999	14156	8.01761	5.33947

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0007446 (v1.0)	5786	H3009B04-3	Mm.2952	Fen1	14156	U038796	NAP094676-001	Fen1;	TC911199,TC830541,TC830540,TC830539	P39749	U,F,2	2.7479	3.0394	3.0175	3.3988	3.0135	3.3009	3.2221

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0007446 (v1.0)	1421731_a_at	Mm.2952	Fen1	NM_007999.3	14156	140.275	0	91.075	122.3	238.825
0007446 (v1.0)	1436454_x_at	Mm.2952	Fen1	NM_007999.3	14156	1057.5	0	814.25	1421.85	1095.05

N/A

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0007446 (v1.0)	Fen1	14156	1	1	0	1	1	0